Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009292.1 Kokia drynarioides strain JFW-HI SEQ_123998, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46823

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8611--8662
21
2.4
21
80
6
59
32
1
3
61
1.25
9851--9929
26
3.1
25
65
21
65
17
18
11
51
1.75
9819--9929
50
2.1
52
93
6
190
18
18
11
51
1.76
12838--13030
87
2.2
87
84
6
235
49
4
2
43
1.37
12872--13058
87
2.1
88
92
2
306
48
3
2
45
1.32
12876--13101
87
2.6
86
78
10
203
47
5
2
44
1.39
12760--13183
210
2.0
209
86
4
595
48
5
2
42
1.41
12960--13380
122
3.5
121
89
2
630
48
6
3
42
1.44
13139--13345
64
3.3
63
70
17
157
52
3
2
41
1.33
13372--13426
26
2.1
26
90
6
85
52
10
0
36
1.37
19356--19388
15
2.2
15
94
0
57
24
0
27
48
1.51
19454--19726
43
6.3
44
75
9
222
26
15
25
32
1.96
19481--19726
86
2.8
86
83
3
289
26
15
25
32
1.96
24323--24484
87
1.9
87
80
2
191
35
23
13
27
1.93
26050--26074
7
3.6
7
100
0
50
44
40
0
16
1.47
27495--27542
21
2.2
21
85
3
60
33
18
4
43
1.69
31505--31530
1
26.0
1
100
0
52
100
0
0
0
0.00
32696--32735
21
1.9
21
100
0
80
20
25
15
40
1.90
35222--35270
25
1.9
26
87
4
73
42
4
4
48
1.40
35958--35994
6
6.2
6
100
0
74
16
35
0
48
1.46
35958--36002
18
2.5
18
92
0
63
17
33
0
48
1.48
45256--45316
23
2.7
22
75
9
61
49
1
3
45
1.28
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46159--46192
17
2.0
17
88
0
50
17
0
0
82
0.67
46301--46360
27
2.3
27
88
8
88
36
15
35
13
1.86
46524--46573
12
4.3
11
82
12
55
74
0
22
4
0.99
46536--46573
12
3.1
12
88
7
58
78
0
18
2
0.86

Tables:   1

The End!