Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009331.1 Kokia drynarioides strain JFW-HI SEQ_124038, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  160581

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1640--1696
19
3.1
19
85
7
64
56
0
3
40
1.17
11042--11116
31
2.4
31
84
8
100
10
6
10
72
1.29
11160--11190
12
2.7
11
90
9
53
29
0
0
70
0.87
11688--11756
29
2.3
30
78
14
72
43
0
4
52
1.21
13699--13838
68
2.1
68
98
0
271
27
10
10
52
1.68
19462--19595
72
1.9
71
93
1
232
18
8
28
44
1.80
32513--32588
38
2.0
39
84
2
100
36
1
17
44
1.57
32566--32617
15
3.4
15
76
10
52
48
1
7
42
1.43
40439--40505
29
2.3
30
89
2
100
37
1
10
50
1.46
40488--40540
18
2.8
19
80
11
56
45
1
3
49
1.31
41985--42096
56
2.0
56
96
3
208
50
12
14
23
1.77
75851--76200
175
2.0
175
96
1
648
43
4
23
28
1.73
77763--77801
6
6.5
6
87
0
51
46
0
30
23
1.53
81817--81873
25
2.3
24
84
6
78
35
3
0
61
1.13
85560--85612
20
2.6
21
75
21
58
43
7
3
45
1.50
99393--99432
18
2.3
18
87
8
57
57
10
2
30
1.45
99987--100038
17
3.2
17
76
15
56
71
0
1
26
0.97
102342--102533
96
2.0
96
83
6
246
36
14
19
28
1.91
102764--103208
30
15.0
30
75
6
146
33
4
28
33
1.76
102832--103178
59
5.9
59
80
4
385
34
3
27
35
1.73
104226--104254
3
9.7
3
100
0
58
34
0
0
65
0.93
104863--104909
17
2.8
17
83
0
67
51
2
0
46
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
112985--113107
12
10.2
12
85
3
131
65
0
34
0
0.99
112985--113106
48
2.5
48
87
0
181
64
0
34
0
0.99
114671--114707
18
2.0
18
89
5
56
62
2
0
35
1.10
127317--127782
156
3.0
154
85
3
639
27
23
20
28
1.99
147415--147452
4
9.5
4
94
0
67
47
26
2
23
1.65
154715--154748
13
2.9
11
84
16
50
67
8
17
5
1.37
154720--154753
13
2.6
13
100
0
68
70
8
11
8
1.34
155905--155999
30
3.2
30
65
3
75
37
6
11
44
1.66
157157--157249
43
2.2
42
80
5
98
32
10
7
49
1.66
157809--157945
45
3.0
45
84
0
175
32
25
21
21
1.98
158210--158263
14
3.9
14
80
7
56
51
16
3
27
1.61
158212--158276
28
2.3
29
87
7
91
50
18
6
24
1.69

Tables:   1

The End!