Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009335.1 Kokia drynarioides strain JFW-HI SEQ_124042, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44614

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--27
14
1.9
14
100
0
54
92
0
7
0
0.38
2800--2834
17
2.1
17
94
0
61
31
2
5
60
1.35
6591--6749
4
39.0
4
82
3
138
27
2
3
67
1.19
6591--6729
41
3.5
41
84
7
178
28
2
2
66
1.17
8789--8952
12
14.5
11
69
12
66
68
17
4
10
1.34
8820--8932
47
2.5
46
73
9
90
68
16
5
9
1.36
8805--8882
24
3.3
24
77
8
79
70
14
3
11
1.29
8832--8916
35
2.5
33
86
5
107
68
14
5
11
1.38
8879--8919
22
1.9
22
85
5
57
65
17
7
9
1.44
8832--8916
34
2.5
32
85
12
100
68
14
5
11
1.38
8857--8927
33
2.1
34
82
7
83
69
16
4
9
1.33
10049--10177
23
5.5
23
82
6
143
44
21
22
11
1.84
10003--10181
46
3.9
44
74
13
121
43
20
23
13
1.87
9999--10152
69
2.2
68
82
11
170
45
20
21
12
1.84
11892--11929
15
2.4
16
86
8
60
52
5
0
42
1.24
12111--12161
9
5.4
9
79
9
57
37
1
39
21
1.65
13321--13366
19
2.5
19
83
16
62
50
6
0
43
1.28
16593--16661
24
2.9
24
91
0
111
55
5
11
27
1.58
16581--16663
24
3.5
24
86
0
103
49
8
13
28
1.71
16936--17037
50
2.0
50
96
0
186
26
29
10
33
1.90
17607--17634
14
2.0
14
100
0
56
14
21
14
50
1.78
18649--18710
24
2.6
24
92
0
97
48
8
14
29
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23677--23759
41
2.0
41
90
0
130
39
7
21
31
1.81
24668--24692
13
1.9
13
100
0
50
36
0
16
48
1.46
25282--25315
3
12.0
3
87
12
54
32
0
0
67
0.91
42646--42837
96
2.0
95
83
8
237
36
14
20
29
1.91
43169--43548
117
3.2
117
90
3
579
28
4
34
32
1.77
43169--43548
176
2.2
176
88
4
563
28
4
34
32
1.77
43169--43548
59
6.5
59
89
4
556
28
4
34
32
1.77
43210--43548
29
11.6
29
77
15
326
28
4
34
32
1.76
43169--43548
29
13.0
28
75
16
319
28
4
34
32
1.77

Tables:   1

The End!