Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009357.1 Kokia drynarioides strain JFW-HI SEQ_124064, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38097

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3789--4185
53
7.5
53
86
0
506
26
17
22
32
1.96
9623--9772
33
4.5
33
73
8
124
28
15
26
30
1.96
9587--9771
102
1.8
102
92
0
316
29
15
25
29
1.96
13498--13545
20
2.3
21
82
3
62
20
16
16
45
1.85
13877--14813
98
9.6
97
83
3
1003
36
19
19
24
1.95
14489--14645
47
3.3
47
68
10
136
34
19
19
26
1.96
16389--16444
5
10.6
5
85
11
76
19
1
1
76
0.96
16389--16444
21
2.7
20
88
8
76
19
1
1
76
0.96
16471--16504
17
2.0
17
88
0
50
20
8
8
61
1.52
16648--16686
20
1.9
20
84
5
51
12
10
5
71
1.28
16648--16690
21
2.0
21
82
8
52
13
9
4
72
1.26
21866--21901
15
2.4
15
90
0
54
2
0
52
44
1.15
21877--21907
15
2.1
15
93
0
53
3
0
48
48
1.17
24708--24767
30
2.0
30
100
0
120
26
20
16
36
1.93
24816--24890
33
2.3
33
97
0
141
22
22
14
40
1.91
28502--28553
26
2.0
26
100
0
104
42
11
7
38
1.70
34989--35028
2
20.0
2
84
0
53
50
2
2
45
1.28

Tables:   1

The End!