Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009366.1 Kokia drynarioides strain JFW-HI SEQ_124073, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  258741

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
768--803
15
2.4
15
90
0
54
52
0
0
47
1.00
7426--7513
40
2.2
40
100
0
176
40
10
22
26
1.86
10613--10755
75
1.9
75
98
0
277
13
9
32
44
1.76
23313--23361
23
2.4
19
78
18
53
59
4
0
36
1.17
33459--33492
17
1.9
18
88
5
52
50
0
0
50
1.00
40382--40441
32
1.9
31
93
3
102
40
1
6
51
1.38
41101--41130
6
5.0
6
95
0
51
80
0
16
3
0.85
85061--85098
2
19.0
2
100
0
76
50
0
0
50
1.00
85198--85239
22
1.9
22
90
0
66
26
4
11
57
1.54
96073--96124
25
2.0
27
85
7
72
50
9
7
32
1.64
102969--103047
26
3.1
27
72
17
87
56
10
6
26
1.56
108009--108038
2
15.5
2
93
6
53
50
0
0
50
1.00
117856--117895
2
20.5
2
94
5
73
47
0
0
52
1.00
118661--118711
24
2.1
24
82
10
59
56
1
5
35
1.35
125017--125069
15
3.3
15
82
12
61
0
43
0
56
0.99
125017--125062
18
2.6
18
86
3
58
0
39
0
60
0.97
125020--125087
12
5.1
14
71
26
51
0
45
0
54
0.99
126122--126223
51
2.0
51
94
0
177
44
10
5
39
1.64
142644--142754
52
2.1
52
89
0
168
36
16
5
42
1.71
142664--142774
52
2.1
52
83
3
134
37
16
5
40
1.71
143661--143723
29
2.2
29
86
11
85
47
12
12
26
1.78
159117--159204
38
2.6
32
79
19
113
28
17
2
52
1.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
159123--159199
38
2.0
38
100
0
154
28
15
2
53
1.56
166064--166093
5
6.0
5
100
0
60
20
0
0
80
0.72
166545--166585
21
2.1
19
86
9
55
19
4
17
58
1.56
166805--166846
15
2.7
15
85
3
57
47
2
0
50
1.14
169586--169655
29
2.4
28
73
4
68
55
5
1
37
1.32
173900--174518
205
3.0
205
98
0
1202
30
17
19
32
1.95
177511--177597
45
1.9
45
90
0
138
48
10
22
18
1.78
183039--183203
79
2.1
80
89
4
255
48
19
5
26
1.70
193625--193700
30
2.5
30
84
4
89
27
19
11
40
1.87
193954--194052
31
3.3
30
78
16
114
53
11
13
22
1.70
198276--198318
11
3.8
11
80
17
52
32
2
0
65
1.06
203455--203798
188
1.8
190
86
3
498
22
9
16
50
1.74
203646--203956
112
2.8
112
87
3
446
25
9
16
49
1.75
207189--207223
18
2.1
18
89
10
56
65
2
2
28
1.21
212598--212627
3
10.0
3
100
0
60
33
0
0
66
0.92
213117--213252
66
2.0
67
90
7
213
37
1
12
48
1.50
215571--215637
29
2.3
29
80
15
75
32
11
14
40
1.83
219025--219107
35
2.3
35
83
4
103
51
20
15
12
1.75
220962--221052
45
2.0
45
85
8
123
48
6
5
39
1.52
221123--221174
25
2.1
25
96
0
95
11
25
7
55
1.61
248350--248456
49
2.3
46
86
4
142
33
10
13
42
1.77
255607--255699
46
2.0
45
87
2
132
25
11
24
37
1.90

Tables:   1

The End!