Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009373.1 Kokia drynarioides strain JFW-HI SEQ_124080, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73257

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
994--1048
23
2.4
23
87
0
74
10
30
20
38
1.87
1037--1117
23
3.5
23
86
5
110
13
19
27
39
1.89
1015--1117
46
2.2
46
79
6
111
12
23
25
38
1.90
9474--9509
2
18.0
2
100
0
72
50
0
0
50
1.00
9674--9751
29
2.7
28
72
18
70
39
5
5
50
1.47
10275--10315
21
2.0
21
95
0
73
65
2
0
31
1.05
10676--10716
22
1.9
21
85
14
57
48
0
14
36
1.44
14312--14361
23
2.2
23
86
10
68
24
12
14
50
1.76
14419--14444
4
6.5
4
100
0
52
0
0
23
76
0.78
14457--14522
24
2.8
23
79
4
69
22
13
18
45
1.84
18116--18152
15
2.4
16
90
9
67
29
8
16
45
1.76
28438--28476
6
6.5
6
100
0
78
17
66
0
15
1.25
31743--31772
14
2.1
15
93
6
53
76
0
0
23
0.78
31939--32271
141
2.4
138
84
6
413
51
10
13
24
1.73
32017--32306
138
2.1
140
79
8
306
50
12
12
24
1.74
37297--37325
2
14.5
2
100
0
58
51
0
0
48
1.00
39574--39636
31
2.1
31
84
3
83
46
22
12
19
1.83
39581--39658
31
2.7
29
78
9
81
42
20
15
21
1.89
44557--44590
14
2.4
14
95
0
59
17
0
35
47
1.48
44642--44696
7
7.7
7
79
4
56
23
0
30
45
1.53
44642--44722
36
2.3
36
80
2
92
22
1
29
46
1.59
54638--54662
2
12.5
2
100
0
50
52
0
48
0
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54668--54698
6
5.2
6
96
0
53
16
12
51
19
1.76
70385--70424
21
1.9
21
84
0
53
47
7
10
35
1.65

Tables:   1

The End!