Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009385.1 Kokia drynarioides strain JFW-HI SEQ_124092, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50807

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
566--643
29
2.6
29
75
22
72
33
19
5
42
1.73
512--635
30
4.2
29
72
13
76
33
21
6
37
1.79
608--947
59
5.7
59
88
4
436
30
27
6
35
1.82
619--947
119
2.8
117
88
3
462
31
28
6
34
1.81
608--945
178
1.9
177
85
4
466
30
28
5
35
1.81
861--970
28
3.8
28
77
11
114
30
30
6
32
1.82
1907--1952
16
2.9
16
75
15
51
32
4
13
50
1.61
8306--8336
6
5.2
6
100
0
62
48
16
16
19
1.81
13133--13160
2
14.0
2
100
0
56
50
0
0
50
1.00
13799--13876
31
2.5
32
85
6
97
47
3
7
41
1.50
20773--20850
12
6.6
12
77
2
86
71
19
2
6
1.19
20773--20859
24
3.7
24
79
3
95
71
19
2
6
1.20
20791--20836
23
2.2
20
88
11
65
69
19
4
6
1.28
20781--20859
35
2.2
35
80
10
54
69
20
2
7
1.25
20773--20859
12
7.3
12
77
2
77
71
19
2
6
1.20
20852--20901
21
2.3
22
86
3
75
58
22
10
10
1.60
20893--20964
21
3.4
21
88
5
110
69
16
6
6
1.33
21293--21380
41
2.2
41
82
10
101
47
2
11
38
1.52
25515--25787
51
5.4
51
85
3
327
30
23
13
32
1.93
32425--32471
23
2.0
25
87
8
71
53
6
4
36
1.46
38666--38947
118
2.4
117
87
1
395
26
19
23
31
1.98
42438--42470
17
1.9
17
88
11
50
24
12
0
63
1.28
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42594--42657
18
3.5
18
78
2
65
59
1
1
37
1.16
45716--45803
44
2.0
43
91
4
142
32
2
6
57
1.37
48586--48676
39
2.3
38
81
7
103
30
17
20
30
1.96
48603--48682
39
2.0
40
90
2
126
30
17
21
31
1.96

Tables:   1

The End!