Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009392.1 Kokia drynarioides strain JFW-HI SEQ_124099, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  143751

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
873--999
23
5.6
22
76
11
105
11
20
24
43
1.85
11705--11744
2
20.0
2
100
0
80
50
0
50
0
1.00
12778--12835
29
2.0
30
89
3
91
27
1
8
62
1.35
13271--13313
21
2.2
20
87
8
61
27
2
0
69
1.00
14497--14526
2
15.0
2
100
0
60
50
50
0
0
1.00
15498--15527
2
15.0
2
100
0
60
50
0
0
50
1.00
18915--18975
21
2.9
22
76
16
65
57
0
3
39
1.15
30476--30501
6
4.3
6
100
0
52
0
84
0
15
0.62
40019--40057
12
3.2
12
85
0
51
46
20
5
28
1.72
41529--41574
18
2.5
18
82
3
56
36
13
10
39
1.79
41691--41749
29
2.0
29
83
3
73
22
42
0
35
1.54
41854--41909
29
1.9
29
85
7
78
23
39
0
37
1.55
42447--42483
19
1.9
19
94
0
65
43
5
10
40
1.63
53686--53755
23
3.0
22
83
10
86
42
17
11
28
1.83
57708--57745
19
2.0
19
85
10
51
21
2
5
71
1.19
57992--58025
2
17.0
2
93
0
59
50
0
2
47
1.16
64827--64874
25
1.9
25
95
0
87
50
31
8
10
1.66
65118--65164
23
2.0
24
84
12
62
55
4
0
40
1.19
65246--65338
28
3.5
28
71
14
106
59
3
0
37
1.14
65250--65376
51
2.6
49
87
6
168
57
3
0
37
1.23
65324--65353
13
2.3
13
94
0
51
63
3
0
33
1.11
67201--67231
16
1.9
16
93
0
53
35
9
0
54
1.33
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71732--71816
42
2.0
42
97
0
161
38
14
27
20
1.90
72114--72238
23
5.4
23
81
7
92
12
20
20
46
1.82
72146--72254
45
2.4
46
86
4
143
14
18
21
45
1.84
95737--95841
25
4.4
25
80
9
112
14
26
19
40
1.89
95737--95850
48
2.4
48
79
8
133
14
25
19
40
1.90
97122--97174
28
1.9
28
88
3
81
67
5
7
18
1.35
97471--97504
1
34.0
1
100
0
68
100
0
0
0
0.00
97515--97549
1
35.0
1
100
0
70
100
0
0
0
0.00
107173--107223
20
2.4
20
81
18
59
33
0
1
64
1.05
107173--107237
27
2.4
27
73
14
62
32
0
1
66
1.01
110095--110128
17
2.0
17
88
0
50
0
35
2
61
1.11
113573--113598
6
4.3
6
100
0
52
15
15
15
53
1.73
114197--114247
24
2.1
25
88
3
77
49
5
19
25
1.71
120249--120304
28
2.0
28
100
0
112
32
28
17
21
1.96
123944--123986
19
2.3
19
100
0
86
39
20
25
13
1.90
134303--134372
29
2.3
30
82
4
79
34
5
12
47
1.66
134398--134423
12
2.2
12
100
0
52
53
7
0
38
1.30
137342--137377
16
2.2
16
90
0
54
44
8
36
11
1.70
137776--137815
19
2.1
19
85
0
53
75
0
2
22
0.93
138215--138265
22
2.2
25
86
10
72
62
1
0
35
1.06
138214--138266
24
2.2
25
80
16
67
64
1
0
33
1.05

Tables:   1

The End!