Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01009394.1 Kokia drynarioides strain JFW-HI SEQ_124101, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 985

Length: 1643
ACGTcount: A:0.39, C:0.14, G:0.13, T:0.34


Found at i:1262 original size:14 final size:14

Alignment explanation


    Indices: 1243--1271  Score: 58
    Period size: 14  Copynumber: 2.1  Consensus size: 14

       1233 TTTTACAAGA

                          
       1243 AAAAAATTTATTTT
          1 AAAAAATTTATTTT

                          
       1257 AAAAAATTTATTTT
          1 AAAAAATTTATTTT

             
       1271 A
          1 A

       1272 TGTTAACATA


Statistics
Matches: 15,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   15  1.00

ACGTcount: A:0.52, C:0.00, G:0.00, T:0.48


Consensus pattern (14 bp):   
AAAAAATTTATTTT
Done.