Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009402.1 Kokia drynarioides strain JFW-HI SEQ_124109, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  177640

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1576--1601
6
4.3
6
100
0
52
50
0
0
50
1.00
3513--3548
3
12.0
3
100
0
72
0
33
0
66
0.92
14245--14333
31
3.0
28
77
11
79
32
3
2
61
1.24
15209--15275
31
2.2
30
82
12
82
31
4
4
59
1.37
15219--15278
31
1.9
31
90
6
95
30
3
5
61
1.33
28235--28275
20
2.1
19
86
9
55
51
24
0
24
1.49
33695--33741
21
2.3
21
86
13
64
44
19
8
27
1.79
35242--35282
3
13.7
3
100
0
82
34
0
0
65
0.93
35437--35468
5
6.4
5
100
0
64
0
59
0
40
0.97
38473--38512
13
3.1
14
79
17
50
45
15
0
40
1.46
45133--45163
15
2.0
16
93
6
55
58
9
6
25
1.54
46559--46622
31
2.1
31
85
5
85
34
0
9
56
1.32
50155--50180
1
26.0
1
100
0
52
100
0
0
0
0.00
61096--61144
15
3.3
15
77
11
55
55
0
0
44
0.99
61580--61604
13
1.9
13
100
0
50
96
4
0
0
0.24
61572--61604
16
2.1
16
100
0
66
93
6
0
0
0.33
66893--66943
27
2.0
25
88
7
75
52
0
1
45
1.12
67209--67251
18
2.5
17
76
3
50
34
0
2
62
1.08
67551--67578
6
4.7
6
100
0
56
0
53
32
14
1.41
79570--79616
24
2.0
24
83
8
60
36
8
8
46
1.65
95488--95521
3
11.3
3
100
0
68
67
0
0
32
0.91
98491--98527
17
2.1
19
90
10
60
29
2
5
62
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
98492--98566
19
3.7
20
76
22
68
32
1
6
60
1.31
107454--107502
16
3.1
17
77
11
50
51
2
0
46
1.12
114200--114324
23
5.3
23
86
3
169
44
22
21
12
1.85
114178--114324
46
3.2
46
85
3
190
44
21
20
12
1.85
116094--116155
24
2.6
24
86
0
97
30
9
6
53
1.59
117631--117669
19
2.2
18
90
9
62
51
25
0
23
1.49
148569--148609
16
2.4
18
76
19
52
60
0
0
39
0.96
156910--156935
6
4.3
6
100
0
52
0
15
34
50
1.45
166533--167129
298
2.0
298
96
1
1090
41
9
11
37
1.75
172130--172172
22
1.9
23
85
4
61
62
2
4
30
1.28
174031--174099
31
2.3
31
97
2
131
42
4
5
47
1.47

Tables:   1

The End!