Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009437.1 Kokia drynarioides strain JFW-HI SEQ_124144, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49626

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
600--625
2
13.0
2
100
0
52
50
0
0
50
1.00
1772--2204
29
14.7
30
81
5
442
33
28
3
33
1.76
1753--2299
59
9.3
59
79
7
458
33
28
3
34
1.75
2221--2298
29
2.6
30
78
9
88
34
28
1
35
1.66
3711--3765
27
2.0
29
85
7
78
36
10
0
52
1.37
5555--5671
62
1.9
61
84
5
157
53
4
2
39
1.34
5727--5762
18
2.1
18
89
5
56
30
0
5
63
1.17
5979--6023
24
1.9
24
86
4
65
42
0
8
48
1.34
6220--6619
30
13.6
28
74
12
136
33
5
28
33
1.79
6224--6653
59
7.3
57
77
7
328
33
4
28
33
1.77
6328--6654
30
11.1
30
75
5
247
32
3
29
34
1.76
6224--6654
29
14.7
29
76
8
270
33
4
28
33
1.77
8513--8559
17
2.8
17
86
0
67
57
2
2
38
1.23
9301--9887
194
2.9
197
85
3
739
21
24
18
35
1.95
9497--9935
206
2.1
206
89
0
644
21
23
18
35
1.96
10703--10792
46
2.0
46
84
8
121
11
26
16
45
1.81
21789--22010
29
7.7
28
83
7
257
33
4
28
34
1.76
23252--23331
17
4.7
17
84
0
106
52
2
1
43
1.22
23249--23331
6
14.5
6
69
14
59
51
2
1
44
1.22
23249--23331
11
7.2
12
70
15
59
51
2
1
44
1.22
25822--25856
3
11.7
3
100
0
70
0
34
0
65
0.93
34519--34579
32
1.9
32
96
0
113
27
16
6
49
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39461--39624
84
2.0
84
90
2
258
28
23
12
35
1.92
39918--39952
16
2.2
16
89
0
52
11
5
2
80
1.00
39911--39955
21
2.1
22
87
4
65
11
6
4
77
1.09
41471--41512
21
2.0
21
90
0
66
42
14
11
30
1.81
42693--42730
13
2.8
13
85
14
51
18
2
0
78
0.86
43466--43649
99
1.8
102
79
11
218
35
13
23
27
1.92
44976--45019
16
2.8
16
77
16
56
18
9
0
72
1.10

Tables:   1

The End!