Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009445.1 Kokia drynarioides strain JFW-HI SEQ_124152, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73358

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
663--990
60
5.6
58
79
8
353
34
17
19
28
1.95
663--1006
116
3.0
115
79
8
376
34
17
18
30
1.94
2158--2207
22
2.3
21
83
13
57
50
6
4
40
1.46
2254--2285
3
10.7
3
100
0
64
31
0
0
68
0.90
4635--4666
14
2.3
14
94
0
55
37
9
0
53
1.34
12386--12424
21
1.9
21
89
5
62
46
0
0
53
1.00
21689--21726
20
1.9
20
88
0
58
0
18
5
76
0.97
32732--32757
2
13.0
2
100
0
52
50
0
50
0
1.00
33460--33496
18
2.1
18
100
0
74
27
18
5
48
1.70
33687--33815
23
5.6
23
77
11
120
39
22
25
12
1.89
33659--33793
23
5.6
25
76
16
117
40
19
27
13
1.89
33683--33807
48
2.7
47
85
7
157
40
20
25
13
1.89
33781--33847
22
3.0
22
80
2
80
40
25
19
14
1.90
40492--40521
15
1.9
16
93
6
53
23
0
0
76
0.78
40545--40579
15
2.2
16
90
5
54
22
0
0
77
0.78
40494--40662
66
2.7
66
85
11
216
41
0
2
55
1.15
44754--44782
10
2.7
11
94
5
51
86
0
13
0
0.58
45674--45704
8
3.9
8
95
0
53
74
0
25
0
0.82
45656--45736
28
3.0
25
79
12
81
75
0
20
3
0.96
45683--45735
26
2.0
26
85
10
72
77
0
22
0
0.77
45691--45734
12
3.4
13
78
12
54
79
0
20
0
0.73
45683--45734
20
2.6
21
82
17
67
78
0
21
0
0.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46654--46830
50
3.5
50
82
0
210
35
15
25
23
1.94
46885--48001
39
28.0
40
69
9
463
33
22
17
26
1.96
46885--47940
80
13.2
80
87
1
1477
33
22
17
26
1.96
50299--50331
14
2.2
16
89
10
52
75
6
6
12
1.16
55548--55605
23
2.6
23
97
2
109
37
20
31
10
1.86
61138--61181
22
2.0
23
86
13
65
38
2
4
54
1.33
64901--64927
2
13.5
2
100
0
54
48
0
0
51
1.00
66784--66816
17
1.9
17
88
11
50
60
0
0
39
0.97
67392--67424
17
1.9
17
88
11
50
78
0
3
18
0.87

Tables:   1

The End!