Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009450.1 Kokia drynarioides strain JFW-HI SEQ_124157, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21166

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
802--845
14
3.1
14
80
0
52
31
9
31
27
1.88
3301--3399
36
2.8
36
93
3
164
25
26
14
34
1.94
4781--4972
96
2.0
96
82
8
230
36
12
19
31
1.89
5288--5663
59
6.4
58
78
6
348
33
4
28
33
1.78
5348--5663
29
10.8
29
77
7
291
34
3
27
34
1.75
6686--6739
16
3.6
16
69
19
53
46
1
0
51
1.11
6665--6714
19
2.5
21
93
6
86
44
2
0
54
1.11
6665--6721
19
2.9
19
86
5
78
42
1
0
56
1.10
6678--6738
28
2.1
29
90
3
97
44
1
0
54
1.10
7341--7402
15
4.2
15
87
2
90
17
14
27
40
1.89
7422--7500
34
2.4
33
86
2
113
50
5
0
44
1.24
7422--7494
17
4.4
17
86
5
96
52
4
0
43
1.20
9308--9508
88
2.3
88
95
0
359
31
10
26
30
1.91
9308--9457
29
5.2
29
70
13
112
30
11
26
31
1.91
9308--9537
88
2.6
88
90
2
329
32
10
26
31
1.89
9500--9693
30
6.5
30
79
2
169
37
4
21
36
1.73
9500--9693
59
3.3
58
81
5
192
37
4
21
36
1.73
10828--10906
3
26.3
3
92
5
133
34
1
0
64
1.02
11551--11596
6
8.0
6
79
18
53
52
2
2
43
1.25
11551--11624
17
4.4
17
82
5
96
54
4
1
40
1.28
11552--11596
11
3.9
12
80
16
51
53
2
2
42
1.25
11551--11624
34
2.2
34
90
0
112
54
4
1
40
1.28
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17328--17422
50
1.9
49
87
6
138
35
10
17
35
1.85
17310--17455
50
2.9
49
76
11
136
34
13
15
36
1.86
17657--17689
17
1.9
17
88
11
50
66
3
0
30
1.06
20148--20228
28
2.9
28
74
18
78
19
9
4
65
1.41

Tables:   1

The End!