Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009451.1 Kokia drynarioides strain JFW-HI SEQ_124158, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47154

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1737--1942
115
1.8
113
86
2
295
33
17
25
23
1.97
1955--2075
49
2.5
49
97
2
226
32
16
29
21
1.95
2665--2750
6
14.8
6
72
10
72
41
2
4
51
1.35
2667--2745
11
7.0
11
73
8
61
40
2
3
53
1.33
2665--2717
23
2.3
23
90
0
79
43
3
1
50
1.30
2651--2765
17
6.4
17
76
15
97
41
2
4
51
1.35
3430--3539
3
34.7
3
71
13
69
57
2
2
37
1.27
3434--3533
33
2.9
33
77
13
96
58
3
3
36
1.29
3434--3533
36
2.8
37
77
14
104
58
3
3
36
1.29
3415--3539
13
9.0
14
72
17
75
56
3
3
37
1.32
4635--4739
29
3.6
28
73
18
81
36
22
6
34
1.81
4645--4877
59
4.0
59
75
6
179
35
24
6
34
1.80
9473--9506
9
3.8
9
100
0
68
11
52
0
35
1.38
9472--9512
18
2.3
18
86
0
64
14
48
0
36
1.44
32077--32115
19
2.1
19
95
0
69
46
2
0
51
1.14
43836--43931
35
2.7
37
80
6
117
35
16
23
23
1.95
44679--44729
21
2.4
21
83
0
66
31
13
21
33
1.92

Tables:   1

The End!