Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009458.1 Kokia drynarioides strain JFW-HI SEQ_124165, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60885

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
588--637
6
8.5
6
74
12
50
50
2
4
44
1.32
591--636
23
2.0
24
91
4
76
54
2
4
39
1.32
8503--8527
1
25.0
1
100
0
50
100
0
0
0
0.00
12256--12321
29
2.4
27
82
5
69
43
0
4
51
1.22
12270--12308
20
2.0
20
85
10
53
41
0
2
56
1.13
32583--32611
2
14.5
2
100
0
58
48
0
0
51
1.00
37121--37165
24
1.9
23
90
4
72
40
0
0
60
0.97
37081--37165
37
2.4
37
81
13
90
37
0
2
60
1.10
39644--39712
36
1.9
36
93
0
120
30
17
15
36
1.91
41288--41313
12
2.2
12
100
0
52
50
0
0
50
1.00
41471--41513
21
2.1
21
91
4
70
25
0
13
60
1.34
41773--41879
30
3.6
30
72
16
114
53
11
0
34
1.43
41773--41822
16
3.2
16
76
21
61
56
6
0
38
1.24
41784--41898
59
1.9
59
98
0
221
50
14
0
33
1.49
41494--42246
397
1.9
398
96
0
1391
46
7
7
39
1.59
42171--42220
16
3.2
16
71
21
52
60
6
0
34
1.21
43511--43595
43
2.0
43
81
4
100
32
10
10
45
1.73
44154--44290
45
3.0
45
84
2
168
33
27
18
20
1.96
45232--45274
21
2.0
21
100
0
86
27
9
39
23
1.85
47741--47806
4
16.2
4
80
9
71
0
33
0
66
0.92
47741--47802
13
4.6
15
78
17
66
0
33
0
66
0.92
47740--47806
25
2.7
24
77
11
73
0
34
0
65
0.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
53483--53521
15
2.7
14
76
7
51
43
0
0
56
0.99
59293--59363
28
2.5
28
77
13
74
30
9
29
29
1.89
59315--59393
28
2.8
28
82
7
79
30
6
34
29
1.82
59405--59619
59
3.7
57
75
10
175
36
4
26
33
1.76
59417--59665
29
8.5
29
68
17
97
35
4
24
35
1.74
59434--59640
58
3.5
54
77
12
162
36
4
26
33
1.76

Tables:   1

The End!