Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009459.1 Kokia drynarioides strain JFW-HI SEQ_124166, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  95375

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6656--7023
30
12.4
29
79
11
331
38
23
2
35
1.69
6655--7023
59
6.2
59
80
8
342
38
23
2
35
1.68
6982--7061
29
2.8
27
81
14
81
41
26
5
27
1.76
7431--8015
319
1.8
320
79
7
677
32
18
15
32
1.93
10560--10647
19
4.6
19
92
0
149
11
30
39
18
1.86
11971--12033
27
2.4
26
89
2
90
42
4
3
49
1.39
12142--12212
35
2.0
35
94
0
124
47
7
15
29
1.71
14561--14589
11
2.6
11
100
0
58
41
0
58
0
0.98
14940--15155
30
7.3
30
79
6
190
34
24
2
38
1.68
14940--15183
90
2.7
88
78
10
237
34
24
2
38
1.69
15015--15205
60
3.2
60
79
5
199
33
25
3
38
1.72
14958--15236
90
3.1
90
77
6
219
34
25
2
37
1.71
34871--35019
74
2.0
74
100
0
298
51
6
5
36
1.51
39299--39334
15
2.4
15
95
0
63
22
27
8
41
1.82
49528--49608
15
5.4
15
80
0
90
39
22
11
27
1.87
49527--49608
30
2.7
30
88
0
119
40
21
10
26
1.87
49703--49737
9
3.9
9
84
0
52
14
11
37
37
1.82
49686--49737
27
1.9
27
88
7
79
19
9
34
36
1.84
49686--49738
18
2.9
18
88
0
70
20
9
33
35
1.85
60350--60496
37
4.0
37
86
0
188
16
17
29
36
1.92
60408--60477
21
3.6
21
66
18
60
14
18
31
35
1.91
69491--69550
31
1.9
31
86
0
84
41
11
11
35
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72204--72236
15
2.2
15
89
10
50
57
0
0
42
0.98
72634--72686
27
1.9
28
84
3
72
30
3
13
52
1.57
72656--72734
31
2.6
31
76
9
81
34
5
10
50
1.58
75980--76025
18
2.5
19
75
13
51
41
6
32
19
1.77
78264--78314
26
2.0
26
81
14
61
54
0
3
41
1.19
79062--79122
29
2.0
31
81
12
74
50
0
3
45
1.17
79042--79126
12
7.8
11
69
19
54
52
0
2
44
1.13
79724--79764
3
13.7
3
94
0
73
65
0
31
2
1.05
86970--87015
19
2.6
17
83
16
58
60
0
2
36
1.09
86983--87024
15
2.7
15
80
16
50
59
0
0
40
0.97
90796--90822
2
13.5
2
100
0
54
51
0
0
48
1.00
94128--94200
17
4.4
17
87
1
103
43
0
2
53
1.15
94133--94202
6
12.2
6
73
19
60
45
0
2
51
1.16
94990--95014
9
2.8
9
100
0
50
92
0
0
8
0.40

Tables:   1

The End!