Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009465.1 Kokia drynarioides strain JFW-HI SEQ_124172, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42559

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--33
2
15.5
2
100
0
62
51
0
0
48
1.00
2913--2965
10
5.7
10
72
17
51
52
1
41
3
1.30
2913--2971
18
3.3
18
87
0
82
50
3
42
3
1.35
4268--4310
22
2.0
22
86
9
61
20
6
0
72
1.08
7740--7784
22
2.0
22
100
0
90
44
4
17
33
1.69
8196--8238
22
2.0
22
86
9
61
20
6
0
72
1.08
10639--10708
34
2.1
34
86
0
95
48
10
20
21
1.78
10731--10763
12
2.6
13
85
4
50
69
12
0
18
1.18
12796--12844
12
4.3
11
80
12
55
73
2
8
16
1.16
12802--12844
6
7.2
6
89
0
50
74
2
6
16
1.14
12790--12844
24
2.3
24
84
12
69
72
1
9
16
1.18
12785--12844
18
3.5
17
76
14
52
73
1
8
16
1.16
12853--12878
10
2.6
10
100
0
52
7
7
0
84
0.77
16437--16482
24
1.9
23
86
8
65
56
8
4
30
1.49
16559--16591
13
2.5
13
95
0
57
60
12
0
27
1.32
18708--18734
3
9.0
3
100
0
54
0
33
0
66
0.92
19631--19728
42
2.4
40
86
3
124
39
1
55
4
1.26
22716--22793
41
1.9
41
94
0
138
42
2
26
28
1.69
26041--26132
41
2.2
41
92
0
148
41
4
28
26
1.74
27349--27521
49
3.5
50
82
7
205
38
5
30
25
1.79
29635--29680
25
1.9
25
86
8
69
32
4
6
56
1.45
33811--33855
10
4.7
10
79
20
60
6
8
6
77
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33820--33865
18
2.5
19
82
13
60
4
13
4
78
1.05
34767--34808
19
2.2
19
91
4
66
80
2
0
16
0.81
34767--34818
13
4.1
13
76
14
54
78
1
1
17
0.93
34767--34818
6
8.3
6
82
4
59
78
1
1
17
0.93
39435--39480
25
1.9
24
86
8
67
32
6
6
54
1.52
40531--40585
20
2.8
20
76
10
60
21
1
1
74
1.01

Tables:   1

The End!