Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009474.1 Kokia drynarioides strain JFW-HI SEQ_124182, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  229112

Tables:   1   

This is table  1  of  1  ( 61 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96--210
56
2.1
56
94
0
203
53
7
17
20
1.68
1102--1154
25
2.0
27
86
13
76
41
5
5
47
1.51
1066--1227
79
2.0
80
91
3
265
48
4
8
38
1.54
3449--3487
14
2.8
14
88
0
51
38
2
20
38
1.66
3947--4000
15
3.3
15
74
18
54
44
0
1
53
1.11
4033--4069
16
2.3
16
86
13
58
40
0
0
59
0.97
4175--4209
9
3.8
9
96
3
61
57
0
0
42
0.99
4686--4800
54
2.1
54
100
0
230
33
13
12
40
1.81
8269--8306
18
2.1
19
85
9
53
44
0
0
55
0.99
9536--9565
14
2.1
14
93
0
51
23
0
20
56
1.42
27332--27364
13
2.5
13
95
0
57
63
6
3
27
1.32
27907--27953
16
2.7
18
87
12
64
57
6
0
36
1.24
35529--35570
15
2.9
15
83
13
52
59
0
0
40
0.97
35551--35597
17
2.7
17
77
12
51
65
2
0
31
1.04
38011--38049
20
2.0
20
89
0
60
25
15
25
33
1.95
40797--41257
233
2.0
233
100
0
922
31
15
26
26
1.96
43072--43115
20
2.2
20
84
15
56
13
4
9
72
1.24
48175--48222
25
2.0
23
84
8
60
68
4
2
25
1.18
59609--59649
11
3.7
11
87
9
57
68
0
0
31
0.90
59619--59650
12
2.8
12
95
4
57
65
0
0
34
0.93
60345--60383
5
7.8
5
100
0
78
17
0
0
82
0.68
60402--60450
19
2.6
19
78
12
57
36
0
6
57
1.24
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61243--61298
21
2.7
21
97
0
103
10
7
3
78
1.06
64099--64129
16
1.9
16
93
0
53
87
3
9
0
0.66
82760--82818
31
1.9
31
85
0
82
32
8
10
49
1.67
84748--84779
15
2.2
15
94
5
57
37
3
0
59
1.13
86403--86438
2
18.0
2
100
0
72
50
0
0
50
1.00
92596--92647
22
2.4
21
81
12
52
21
0
3
75
0.97
93760--93812
19
2.8
19
86
8
74
30
13
15
41
1.85
94368--94432
31
2.1
31
94
0
112
44
9
6
40
1.61
99428--99475
23
2.1
23
100
0
96
25
16
20
37
1.93
104521--104551
13
2.4
13
94
0
53
0
12
0
87
0.55
111868--111900
17
1.9
17
93
0
57
42
0
0
57
0.98
115049--115516
234
2.0
234
99
0
927
40
9
10
39
1.71
124493--124522
6
5.0
6
100
0
60
50
0
50
0
1.00
124845--124999
75
2.0
76
95
2
276
47
5
14
32
1.69
129565--129593
13
2.1
14
93
6
51
34
0
0
65
0.93
129989--130036
15
3.6
14
81
13
57
33
0
6
60
1.22
138284--138407
56
2.2
54
84
9
153
37
12
8
41
1.75
139024--139053
6
5.0
6
95
0
51
33
36
16
13
1.88
148186--148272
11
7.7
11
69
21
56
41
1
0
57
1.06
149520--149570
23
2.1
26
89
10
81
35
0
3
60
1.15
149509--149573
23
3.2
19
77
14
60
35
0
3
61
1.12
151233--151407
79
2.2
79
91
0
278
39
8
16
36
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
151628--151701
29
2.5
29
86
4
94
48
14
14
21
1.80
163235--163341
56
2.0
55
85
10
134
45
7
6
40
1.58
165345--165446
23
4.5
22
80
10
116
11
23
20
44
1.84
166248--166275
14
2.0
14
100
0
56
57
0
0
42
0.99
169560--169622
6
10.5
6
94
0
90
49
38
1
11
1.48
172524--172677
76
2.0
76
93
0
263
40
12
11
36
1.78
186000--186092
45
2.1
45
85
4
125
43
17
7
32
1.77
188656--188701
17
2.6
18
78
18
51
63
0
2
34
1.07
196593--196649
19
3.1
19
82
7
64
57
3
0
38
1.16
197428--197493
26
2.6
24
77
20
64
60
0
1
37
1.06
197446--197506
33
1.9
32
90
6
97
55
0
1
42
1.09
204489--204546
31
1.9
29
82
6
71
44
3
6
44
1.47
213435--213531
29
2.9
33
69
25
80
44
1
1
53
1.14
218649--218686
20
1.9
20
89
10
60
57
15
7
18
1.62
219657--219740
42
2.0
42
95
0
150
17
17
15
48
1.81
220559--220593
12
2.9
12
100
0
70
8
25
0
65
1.21
229020--229075
22
2.5
23
79
5
60
41
0
3
55
1.17

Tables:   1

The End!