Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009480.1 Kokia drynarioides strain JFW-HI SEQ_124189, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17653

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2977--3010
3
11.3
3
93
0
59
0
38
0
61
0.96
5584--5654
28
2.4
31
74
9
76
35
15
2
46
1.61
5584--5658
29
2.6
27
77
12
69
34
17
2
45
1.62
5640--5734
29
3.2
29
69
8
75
35
22
6
35
1.79
5703--5858
60
2.7
58
81
5
163
25
24
8
41
1.84
5874--5935
28
2.2
28
86
11
83
32
25
12
29
1.93
7603--7876
146
1.9
148
82
5
349
36
19
27
16
1.93
7602--7970
146
2.5
147
78
6
325
37
18
27
16
1.92
7618--8112
50
10.0
50
67
14
211
37
17
26
17
1.92
7740--8117
100
3.8
100
81
5
410
39
16
26
17
1.90
7740--8117
200
1.9
197
83
4
483
39
16
26
17
1.90
8220--8413
101
1.9
101
84
0
262
35
15
17
31
1.91
8634--10262
206
7.9
206
89
0
2346
35
19
22
22
1.96
10631--10696
6
11.0
6
74
6
62
45
4
1
48
1.32
10617--10668
24
2.2
24
89
0
77
38
3
1
55
1.29
12549--12778
28
7.9
29
69
9
114
33
27
3
34
1.74
12550--12749
28
6.9
29
70
18
123
33
27
3
35
1.74
12549--12780
56
4.0
57
78
10
229
33
28
3
34
1.74
12642--12904
59
4.5
60
82
7
210
30
26
6
36
1.82
14843--14877
18
1.9
18
88
0
52
45
2
0
51
1.16
16735--16767
16
2.1
17
88
11
52
24
3
0
72
0.98
16965--17030
22
3.0
22
100
0
132
45
9
22
22
1.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17629--17653
3
8.3
3
100
0
50
32
36
0
32
1.58

Tables:   1

The End!