Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009506.1 Kokia drynarioides strain JFW-HI SEQ_124217, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72931

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
850--915
32
2.1
32
100
0
132
45
21
12
21
1.84
4525--4559
18
2.0
18
94
5
63
54
0
0
45
0.99
4901--4929
2
14.5
2
100
0
58
48
0
0
51
1.00
7735--7791
24
2.4
24
87
0
78
43
7
7
42
1.58
7810--7878
36
1.9
35
94
2
120
23
15
13
47
1.80
11299--11346
24
2.0
24
95
0
87
31
10
20
37
1.87
16999--17070
28
2.4
31
90
6
114
51
1
1
45
1.18
19850--20288
194
2.3
194
83
2
551
27
17
27
27
1.97
22363--22415
20
2.7
20
90
0
79
39
24
5
30
1.78
23189--23378
23
8.4
22
83
9
190
38
26
20
14
1.91
23189--23378
46
4.2
46
80
11
214
38
26
20
14
1.91
23189--23366
69
2.6
67
89
5
261
38
26
20
14
1.91
26516--26568
26
2.0
26
100
0
106
39
22
11
26
1.88
27736--27780
3
15.0
3
85
0
63
62
2
0
35
1.08
31135--31165
16
1.9
16
93
0
53
45
12
22
19
1.84
31310--31347
18
2.0
20
85
10
53
47
2
28
21
1.64
40141--40464
171
1.9
171
85
1
452
36
17
21
24
1.94
41058--41121
6
11.3
6
69
24
50
39
0
6
54
1.26
41058--41121
10
5.8
10
80
20
74
39
0
6
54
1.26
41052--41121
23
3.1
23
95
2
124
37
0
8
54
1.31
43021--43197
29
6.0
29
80
5
203
33
25
5
35
1.78
43021--43197
59
3.0
58
82
6
205
33
25
5
35
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43035--43217
89
2.1
88
84
1
240
37
23
4
34
1.75
43034--43217
29
6.2
28
78
8
116
36
23
4
34
1.75
44572--44629
28
2.1
28
83
6
73
67
10
1
20
1.29
44589--44629
13
2.9
15
82
10
50
70
7
2
19
1.22
45786--45896
39
2.9
38
80
7
134
39
20
15
24
1.91
45787--45920
39
3.5
37
78
7
124
39
17
17
25
1.91
46329--46437
50
2.2
50
84
1
137
25
18
19
36
1.94
47612--47649
12
3.2
12
85
7
51
0
18
0
81
0.69
47606--47657
11
4.9
10
75
11
50
0
23
0
76
0.78
51143--51198
21
2.7
21
86
5
78
30
7
25
37
1.82
54912--54956
3
15.3
3
86
4
56
60
0
0
40
0.97
54912--54956
12
3.8
12
88
2
65
60
0
0
40
0.97
55237--55284
15
3.2
15
79
5
53
75
2
4
18
1.07
59696--59870
94
1.9
94
81
0
215
40
16
14
28
1.88
69723--69816
36
2.6
36
89
0
152
26
9
24
39
1.86
70263--70306
20
2.2
20
84
11
56
34
11
9
45
1.72
71908--71941
11
3.4
10
88
11
52
0
17
0
82
0.67
71962--72009
3
16.0
3
86
0
51
29
10
0
60
1.30
72432--72931
148
3.4
148
84
4
589
40
4
8
46
1.53

Tables:   1

The End!