Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009517.1 Kokia drynarioides strain JFW-HI SEQ_124228, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34773

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3323--3354
2
16.5
2
93
6
57
53
0
0
46
1.00
3586--3618
3
11.0
3
93
0
57
66
3
0
30
1.06
6116--6192
21
3.7
21
76
0
82
28
16
24
29
1.97
7894--7941
24
1.9
26
87
8
73
64
0
0
35
0.94
14539--14631
17
5.4
17
84
8
116
41
2
2
53
1.25
14539--14631
35
2.7
35
88
3
125
41
2
2
53
1.25
16463--16506
21
2.0
22
91
4
72
36
31
0
31
1.58
16463--16514
21
2.5
21
87
6
70
36
30
1
30
1.69
16483--16799
30
10.7
30
78
8
278
34
29
2
33
1.72
16483--16807
88
3.6
88
78
6
289
34
29
3
32
1.73
28229--29280
206
5.2
205
86
2
1347
34
19
23
22
1.97
29610--29712
11
9.0
11
70
17
59
41
0
3
53
1.26
29611--29670
17
3.6
16
82
10
75
41
0
3
55
1.16
29608--29712
46
2.3
46
86
3
140
41
0
3
53
1.25
29628--29695
29
2.4
28
87
5
91
39
1
4
54
1.30
30981--31044
6
11.0
6
75
18
64
48
3
1
46
1.27
30982--31033
11
4.7
11
74
9
52
46
1
1
50
1.23
30974--31044
17
4.1
17
83
7
90
47
2
1
47
1.25
31071--31150
26
3.1
26
62
16
67
41
28
11
18
1.85
31519--31557
3
13.0
3
100
0
78
66
0
0
33
0.92
31493--31565
15
4.8
15
78
8
58
54
4
5
35
1.42
32232--32260
12
2.5
12
94
5
51
31
44
17
6
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32633--32953
59
5.4
59
86
1
394
34
30
3
32
1.73
32638--32953
29
10.7
30
79
4
295
34
29
2
32
1.72
34000--34189
29
6.4
29
77
9
170
32
29
3
34
1.75
34004--34189
59
3.2
55
77
11
183
32
28
3
34
1.75
34164--34230
21
3.2
21
82
2
91
26
32
2
37
1.72
34128--34261
71
1.9
72
87
4
200
31
31
3
33
1.75
34199--34293
29
3.2
29
83
5
109
34
33
3
28
1.73
34069--34316
131
1.9
130
85
4
338
33
32
2
31
1.73
34199--34362
29
5.6
28
73
13
93
33
31
3
31
1.73

Tables:   1

The End!