Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009521.1 Kokia drynarioides strain JFW-HI SEQ_124232, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82009

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1044--1098
28
2.0
28
88
0
83
56
1
0
41
1.10
1065--1097
17
1.9
17
93
0
57
54
3
0
42
1.15
2337--2361
5
5.0
5
100
0
50
20
60
20
0
1.37
3882--3912
11
2.8
11
100
0
62
9
35
0
54
1.33
4931--4968
15
2.6
14
84
8
58
65
0
0
34
0.93
4937--4996
22
2.8
22
75
12
61
55
0
1
43
1.10
5878--5919
8
5.2
8
77
11
50
59
0
0
40
0.97
5876--5949
24
3.2
23
81
14
89
52
2
0
44
1.15
9553--9607
21
2.8
20
81
8
60
30
5
0
63
1.17
11237--11268
16
2.0
16
93
0
55
37
6
3
53
1.42
11297--11358
28
2.2
29
85
2
81
58
1
1
38
1.18
12155--12181
3
9.0
3
100
0
54
0
0
66
33
0.92
13144--13205
32
1.9
33
86
3
90
27
0
6
66
1.16
28461--28508
20
2.4
20
96
0
87
22
2
29
45
1.64
28472--28518
20
2.4
20
85
3
60
31
4
27
36
1.76
31991--32028
19
2.0
19
100
0
76
57
5
5
31
1.43
35285--35330
22
2.2
21
84
7
58
71
6
4
17
1.24
38159--38272
40
3.0
38
81
10
99
31
26
20
21
1.98
38864--38928
32
2.0
32
100
0
130
41
9
9
40
1.69
60982--61028
25
2.0
23
87
8
67
59
4
2
34
1.29
65326--65358
16
2.0
17
88
5
50
54
18
9
18
1.69
66230--66283
27
2.0
27
82
7
65
27
7
1
62
1.32
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68020--68075
29
1.9
29
85
0
76
42
5
7
44
1.54
68738--68797
31
1.9
31
89
0
93
45
11
10
33
1.74
71530--71575
20
2.3
20
92
3
76
63
13
4
19
1.46
71646--71693
25
1.9
25
91
8
80
33
25
8
33
1.86
80295--80325
10
3.1
10
95
0
53
74
19
6
0
1.03
81907--81965
9
6.2
9
79
13
57
40
1
1
55
1.20
81969--82009
2
20.5
2
100
0
82
51
0
0
48
1.00

Tables:   1

The End!