Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009524.1 Kokia drynarioides strain JFW-HI SEQ_124235, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  161173

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5014--5063
15
3.1
16
78
16
59
42
4
0
54
1.19
5693--5734
17
2.3
19
76
12
52
59
2
0
38
1.10
7327--7360
17
2.0
17
100
0
68
17
0
5
76
0.98
10587--10620
15
2.1
17
89
10
54
47
0
0
52
1.00
15059--15159
48
2.1
49
83
1
123
44
7
8
38
1.65
15360--15423
32
2.0
32
81
6
76
65
4
6
23
1.35
19183--19244
21
2.9
21
80
11
72
24
0
20
54
1.44
30939--31085
73
2.0
73
100
0
294
51
6
4
38
1.48
36442--36489
21
2.3
21
88
0
69
10
31
10
47
1.71
65675--65721
14
3.5
13
82
14
51
70
0
2
27
0.99
65677--65712
18
1.9
18
88
5
54
69
0
2
27
1.02
65675--65721
12
3.4
14
82
14
53
70
0
2
27
0.99
70156--70189
16
2.1
16
88
0
50
50
0
11
38
1.39
70446--70489
17
2.6
16
80
19
54
43
13
29
13
1.83
76687--76729
21
2.2
19
83
8
50
39
2
2
55
1.25
89729--90012
142
2.0
142
98
0
550
38
16
16
28
1.91
93088--93117
7
4.3
7
100
0
60
26
40
16
16
1.90
96186--96236
22
2.2
24
79
10
61
35
7
33
23
1.84
97599--97636
18
2.1
19
90
5
60
60
2
0
36
1.11
97641--97696
30
1.9
30
85
10
80
67
1
1
28
1.10
102029--102091
32
2.0
32
83
0
81
42
6
6
44
1.55
105413--105474
28
2.2
28
100
0
124
33
3
30
32
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
111714--111855
41
3.4
41
89
0
194
45
19
13
22
1.85
125596--125671
30
2.5
30
77
10
84
30
11
11
46
1.77
130286--130324
3
13.0
3
100
0
78
66
0
0
33
0.92
135323--135366
23
1.9
23
90
0
70
38
9
2
50
1.47
140382--140444
21
3.0
21
86
4
101
4
7
22
65
1.38
140382--140450
20
3.4
20
83
2
93
5
8
21
63
1.44
140415--140530
55
2.1
54
81
7
137
5
7
18
68
1.32
140662--140714
26
2.0
26
82
13
65
30
1
3
64
1.22
155395--155438
23
1.9
23
85
0
61
13
15
4
65
1.41
156231--156357
23
5.4
23
82
5
130
44
21
22
12
1.85
156232--156357
46
2.7
46
84
8
173
43
21
22
12
1.86

Tables:   1

The End!