Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009537.1 Kokia drynarioides strain JFW-HI SEQ_124249, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  165714

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11163--11204
18
2.3
18
87
0
57
30
30
14
23
1.94
11526--11556
3
10.3
3
92
0
53
35
32
32
0
1.58
24131--24167
17
2.1
18
90
5
58
37
8
0
54
1.30
27999--28374
188
2.0
188
97
0
716
44
7
10
36
1.68
28479--28524
20
2.5
20
86
10
62
56
2
41
0
1.11
38640--38686
20
2.3
20
75
7
51
59
6
0
34
1.23
38704--38729
12
2.2
12
100
0
52
53
0
0
46
1.00
56938--56984
23
2.0
23
87
8
67
61
6
0
31
1.21
56999--57042
21
2.1
21
100
0
88
59
9
0
31
1.29
57003--57048
21
2.2
21
92
0
74
56
13
0
30
1.37
58059--58097
14
2.7
15
80
15
55
10
12
0
76
1.01
58050--58119
13
5.6
13
80
11
76
8
11
0
80
0.92
63068--63113
24
1.9
23
86
8
65
56
6
4
32
1.45
66260--66316
22
2.6
22
83
5
62
35
1
52
10
1.46
67133--67196
33
1.9
34
87
9
96
29
17
12
40
1.86
68358--68395
20
2.0
20
85
10
53
47
15
10
26
1.78
73903--73942
21
2.0
21
90
5
64
52
0
0
47
1.00
75735--75769
18
2.1
16
89
10
52
28
11
5
54
1.59
77648--77681
15
2.3
15
90
10
52
64
0
0
35
0.94
93677--93732
30
1.9
30
92
7
98
46
1
3
48
1.30
100546--100596
20
2.6
21
82
11
65
23
3
7
64
1.37
107982--108013
2
16.0
2
100
0
64
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108682--108706
1
25.0
1
100
0
50
0
0
0
100
0.00
109654--110023
183
2.0
183
86
0
506
25
25
18
30
1.98
116252--116296
17
2.7
16
78
21
56
48
2
0
48
1.13
152015--152055
8
5.2
8
77
16
50
63
0
0
36
0.95
159619--159678
33
1.9
33
86
10
90
58
3
31
6
1.40
160781--160829
6
8.2
6
90
0
71
46
0
30
22
1.52
162320--162409
28
3.2
28
71
6
83
34
11
25
28
1.90
162383--162708
171
1.9
171
80
6
374
34
10
23
31
1.88
162604--162819
29
7.5
29
75
10
151
34
8
23
33
1.85
162604--162794
58
3.3
58
79
6
185
35
8
23
32
1.86
162668--162866
87
2.3
87
81
3
231
33
7
23
35
1.83
162784--163171
58
6.7
57
76
12
248
33
3
26
36
1.75
162719--163171
29
15.7
29
69
14
208
34
3
25
36
1.75
162668--162964
86
3.4
88
78
6
259
32
6
25
36
1.80
162575--163138
144
3.9
144
77
10
469
34
5
25
34
1.80
162806--163018
86
2.5
86
78
11
211
34
3
26
35
1.74
164083--164124
22
1.9
22
90
9
68
40
2
0
57
1.12
164132--164198
25
2.5
26
81
13
66
59
1
1
37
1.16
164133--164197
14
4.9
14
70
19
50
58
1
1
38
1.17
164827--164886
17
3.5
17
88
4
84
53
3
6
36
1.44

Tables:   1

The End!