Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009538.1 Kokia drynarioides strain JFW-HI SEQ_124250, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  99327

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15532--15562
9
3.6
9
95
4
55
0
22
0
77
0.77
23434--23509
28
2.7
29
80
11
86
26
6
1
65
1.24
30177--30216
21
1.9
21
84
0
53
45
10
2
42
1.51
36886--36911
5
5.2
5
100
0
52
19
61
0
19
1.35
37443--37485
5
8.6
5
100
0
86
0
58
0
41
0.98
38507--38554
23
2.2
20
76
20
51
39
4
0
56
1.19
43448--43568
60
2.0
60
83
1
154
29
18
13
38
1.88
43618--43743
62
2.0
62
90
4
200
28
19
14
37
1.91
43620--43795
62
2.9
62
80
9
191
30
17
14
37
1.90
44349--44637
120
2.4
119
85
6
395
33
15
19
31
1.93
44349--44637
60
4.8
58
79
10
296
33
15
19
31
1.93
51195--51251
26
2.2
25
82
14
71
15
7
10
66
1.42
51539--51584
19
2.2
20
85
11
58
73
2
4
19
1.10
58322--58368
24
2.0
24
95
0
85
46
0
23
29
1.52
59929--60008
23
3.5
22
88
5
115
36
26
23
13
1.92
61422--61498
34
2.2
34
90
2
118
25
29
3
40
1.74
61433--61499
34
2.0
34
96
0
125
26
28
2
41
1.70
66354--66392
19
2.0
20
85
5
53
46
0
2
51
1.14
72364--72405
2
21.0
2
100
0
84
50
0
0
50
1.00
74164--74210
24
2.0
23
87
4
67
31
2
0
65
1.04
83312--83359
25
1.9
25
83
8
62
50
2
6
41
1.39
84664--84688
2
12.5
2
100
0
50
0
48
0
52
1.00

Tables:   1

The End!