Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009576.1 Kokia drynarioides strain JFW-HI SEQ_124290, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20252

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
547--596
24
2.1
24
96
0
91
16
18
24
42
1.89
2144--2195
11
4.5
11
79
15
61
36
3
0
59
1.16
8509--8617
56
1.9
56
88
0
164
50
12
11
24
1.74
9011--9058
17
3.0
15
74
14
51
56
0
4
39
1.19
9563--9633
6
12.3
6
72
19
53
42
1
1
54
1.17
9570--9612
17
2.5
17
92
0
68
39
0
2
58
1.11
9564--9635
23
3.2
22
82
9
74
44
1
1
52
1.18
10205--10329
3
40.7
3
68
13
58
57
4
1
36
1.27
11367--11457
29
3.1
29
81
9
105
35
28
0
36
1.58
11367--11480
29
3.9
29
77
16
101
35
26
1
36
1.67
16602--16645
23
2.0
23
86
4
63
79
4
15
0
0.89
16615--16663
17
3.1
15
88
11
71
81
2
16
0
0.78
17625--18774
99
11.8
99
85
4
1300
39
19
24
16
1.91
18064--18985
49
18.8
49
74
9
639
38
19
25
16
1.92
18163--19018
147
5.8
145
77
7
708
38
18
25
16
1.92
18655--19018
195
1.9
196
86
4
529
40
18
25
15
1.90
19678--19776
17
5.8
17
89
4
146
40
1
3
55
1.22

Tables:   1

The End!