Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009581.1 Kokia drynarioides strain JFW-HI SEQ_124295, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34201

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3348--3593
29
8.4
29
66
16
98
32
5
29
32
1.80
3472--3604
58
2.3
57
82
7
160
32
6
28
33
1.81
3610--3899
30
9.8
28
71
14
140
31
1
29
37
1.66
3608--3924
29
10.7
29
70
14
157
31
1
29
37
1.68
3607--3923
59
5.3
59
79
8
261
30
1
29
37
1.68
3638--3910
89
3.1
90
76
8
245
31
1
29
37
1.68
5857--5949
17
5.3
18
85
7
111
54
3
1
40
1.23
5857--5934
6
13.5
6
75
12
74
53
2
1
42
1.22
5871--5920
23
2.2
23
85
7
66
56
4
0
40
1.18
8511--8561
24
2.1
24
85
7
68
43
3
5
47
1.46
9513--9542
16
1.9
16
93
6
53
16
13
0
70
1.18
9508--9568
22
2.8
22
87
7
72
14
11
1
72
1.20
9522--9568
21
2.2
22
92
3
78
14
8
2
74
1.15
21708--21774
29
2.3
28
80
10
73
62
10
0
26
1.27
21804--21912
44
2.5
43
80
11
116
59
6
1
32
1.33
23888--24129
81
3.0
80
88
1
340
46
11
11
30
1.76
24264--24373
50
2.2
50
88
3
168
53
7
1
37
1.39
24264--24393
50
2.4
54
77
16
144
52
7
1
38
1.40
25958--26054
47
2.1
47
94
0
167
63
0
6
29
1.18
25968--26070
47
2.2
45
88
6
145
67
0
3
28
1.08
27167--27211
21
2.1
21
84
8
56
40
11
2
46
1.52
32957--32995
6
6.5
6
87
0
51
23
30
0
46
1.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32945--32983
18
2.3
18
86
8
55
28
25
0
46
1.53

Tables:   1

The End!