Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009584.1 Kokia drynarioides strain JFW-HI SEQ_124298, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83162

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13091--13222
54
2.4
54
94
2
230
31
15
26
27
1.96
16436--16498
19
3.2
19
77
8
65
53
4
1
39
1.31
25127--25160
17
2.0
17
94
0
59
35
5
32
26
1.81
25865--25911
15
3.1
15
87
0
67
53
2
27
17
1.55
26634--26708
38
2.0
38
100
0
150
25
21
16
37
1.93
35995--36044
15
3.3
15
94
0
91
50
4
32
14
1.61
36004--36055
15
3.5
15
86
0
50
46
9
28
15
1.77
35995--36055
30
2.0
30
87
0
86
47
8
29
14
1.73
44240--44609
37
10.0
37
85
0
488
14
20
29
35
1.93
44372--44471
21
5.2
20
63
30
58
13
21
32
34
1.91
44416--44479
21
3.3
21
68
28
59
12
21
31
34
1.91
48165--48250
26
3.3
26
77
3
84
27
19
22
30
1.98
50269--50310
21
2.0
21
95
0
75
30
23
23
21
1.99
58234--58294
17
3.5
17
84
6
61
24
16
8
50
1.72
58216--58281
34
1.9
34
84
0
87
24
18
9
48
1.76
58855--58892
5
7.6
5
93
0
58
81
0
13
5
0.85
60940--61086
66
2.2
65
85
1
204
40
25
11
21
1.87
63724--63964
100
2.4
100
82
4
272
39
17
24
19
1.92
63724--63964
50
4.8
50
77
7
229
39
17
24
19
1.92
69974--70012
6
6.5
6
87
0
51
23
30
0
46
1.53
72934--73000
22
3.1
22
73
14
68
34
4
11
49
1.60
76393--76444
21
2.5
21
96
0
95
26
21
23
28
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79414--79477
26
2.5
26
78
0
65
25
15
25
34
1.95
83068--83106
19
2.1
19
90
0
60
58
0
7
33
1.26

Tables:   1

The End!