Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009588.1 Kokia drynarioides strain JFW-HI SEQ_124302, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  90065

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5409--5502
26
3.6
26
80
0
116
31
21
20
26
1.98
5409--5528
52
2.3
51
89
2
177
33
23
19
24
1.97
5430--5513
26
3.2
26
82
0
114
36
22
17
22
1.94
5430--5528
26
3.8
24
77
10
90
35
25
18
21
1.95
5604--5646
21
2.1
20
82
4
50
55
4
4
34
1.41
7052--7086
17
2.1
17
88
0
52
51
25
0
22
1.48
9310--9347
20
1.9
20
88
0
58
47
15
0
36
1.46
9568--9601
16
2.1
16
88
0
50
44
17
0
38
1.49
10936--11006
36
2.0
36
86
5
99
35
22
9
32
1.87
13322--13373
26
2.0
27
88
3
79
44
3
11
40
1.59
14379--14535
79
2.0
79
92
0
260
29
15
16
38
1.89
19091--19121
16
1.9
16
93
0
53
70
0
0
29
0.87
29752--29805
27
2.0
27
96
0
99
33
18
1
46
1.60
33845--33890
25
1.9
25
86
8
69
32
4
6
56
1.45
35118--35302
90
2.1
90
100
0
370
42
9
27
21
1.83
40502--40548
23
2.1
22
88
4
67
74
2
10
12
1.16
40566--40625
13
4.8
12
82
15
68
13
8
1
76
1.08
40571--40625
7
8.4
7
83
16
66
12
9
1
76
1.10
40566--40625
6
9.5
6
80
10
59
13
8
1
76
1.08
43089--43140
24
2.2
25
83
13
65
25
5
26
42
1.77
43158--43293
67
2.1
65
89
5
204
51
3
0
44
1.24
43179--43333
67
2.3
67
79
8
163
60
2
1
35
1.19
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43294--43335
18
2.3
18
80
8
50
76
0
2
21
0.90
43741--43770
11
2.7
11
100
0
60
63
10
20
6
1.47
51923--51966
15
3.0
15
80
16
56
61
0
0
38
0.96
51950--52001
22
2.3
23
90
10
88
61
0
0
38
0.96
66110--66610
265
1.9
259
85
4
693
24
17
16
41
1.89
69432--69484
15
3.5
15
71
0
52
37
30
15
16
1.90
77710--77762
20
2.5
21
88
8
74
35
0
13
50
1.41
78316--78539
79
2.8
79
79
5
222
32
24
18
24
1.97
84369--84412
23
1.9
23
90
0
70
40
20
0
38
1.53

Tables:   1

The End!