Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009603.1 Kokia drynarioides strain JFW-HI SEQ_124319, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  152098

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8479--8575
50
1.9
50
100
0
194
39
17
12
30
1.87
23930--23986
29
1.9
30
82
3
71
35
19
15
29
1.93
26362--26881
259
2.0
260
98
0
997
35
15
20
29
1.93
29549--29581
3
11.0
3
100
0
66
66
0
0
33
0.92
31538--31665
64
2.0
63
86
4
177
27
15
6
50
1.68
36273--36595
114
2.7
115
81
6
366
44
17
15
22
1.86
53311--53429
61
2.0
61
81
9
145
31
5
11
52
1.59
55310--55357
19
2.5
19
83
6
62
29
0
2
68
1.01
55380--55412
12
2.9
12
91
8
52
87
0
12
0
0.53
55380--55413
16
2.1
16
88
0
50
85
0
14
0
0.60
56177--56273
46
2.1
46
82
3
115
20
3
17
58
1.52
56229--56264
6
5.8
6
87
6
54
19
0
13
66
1.24
56434--56504
31
2.3
31
83
11
85
22
14
21
42
1.88
69312--69353
18
2.4
19
80
15
54
57
4
2
35
1.33
70492--70761
137
2.0
133
95
2
486
40
5
8
45
1.57
72664--72732
30
2.4
29
83
11
81
62
4
5
27
1.37
72683--72732
15
3.3
15
71
20
50
60
4
6
30
1.39
74395--74465
30
2.3
30
77
20
76
42
0
7
50
1.29
77278--77339
28
2.2
28
83
11
74
62
4
0
32
1.16
81786--81880
48
2.0
48
97
0
181
28
17
13
40
1.88
85443--85578
33
4.4
33
73
20
132
22
21
11
44
1.83
106483--106523
18
2.3
19
79
12
50
36
14
2
46
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
109347--109437
42
2.2
42
85
0
119
24
18
35
21
1.96
110239--110291
21
2.6
20
82
5
61
32
3
1
62
1.24
113771--113829
29
2.0
30
87
9
86
32
6
13
47
1.69
114018--114084
31
2.3
27
74
18
64
40
11
8
38
1.74
118834--118867
13
2.4
15
90
9
54
47
11
8
32
1.71
120145--120185
20
2.0
20
90
0
64
24
14
34
26
1.94
134322--134356
15
2.2
15
90
10
52
20
0
5
74
1.02
134487--134650
84
2.0
84
80
9
192
49
4
1
45
1.29
135115--135176
23
2.6
24
73
19
58
50
4
8
37
1.54
140432--140488
29
1.9
30
89
3
89
35
3
8
52
1.50
140744--140822
30
2.6
30
79
0
104
50
1
6
41
1.36
142839--142942
23
4.5
22
77
9
100
10
21
22
46
1.81
142840--142989
71
2.1
69
86
7
205
12
22
20
45
1.83
142839--142988
23
6.5
20
74
18
84
12
22
20
44
1.84
151371--151424
24
2.2
24
96
0
99
16
16
44
22
1.86
151371--151462
24
3.8
24
75
5
87
19
14
43
22
1.87
151428--151604
39
4.5
39
96
0
318
23
11
41
23
1.87
151692--151819
33
3.8
33
75
8
123
20
14
38
26
1.91
151839--151969
42
3.1
42
83
2
174
14
16
41
27
1.88
151913--152098
93
2.0
93
98
0
363
17
9
41
31
1.80

Tables:   1

The End!