Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009609.1 Kokia drynarioides strain JFW-HI SEQ_124325, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  132609

Tables:   1   

This is table  1  of  1  ( 67 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1172--1246
15
5.0
15
81
0
87
18
12
26
42
1.85
1286--1331
17
2.7
17
93
0
74
54
4
0
41
1.20
2384--2713
45
7.3
45
71
8
240
16
15
26
41
1.89
2379--2713
90
3.7
90
81
5
372
16
15
26
41
1.88
6338--6421
29
2.9
28
75
15
80
38
2
27
32
1.70
6373--6564
59
3.3
58
84
5
226
32
3
27
36
1.74
6373--6621
59
4.2
58
78
11
215
33
3
26
36
1.74
6374--6593
30
7.5
29
75
14
193
32
3
26
37
1.74
6372--6621
29
8.5
29
76
11
188
33
3
26
37
1.74
7740--7789
12
4.2
13
80
12
54
34
0
0
66
0.92
8492--8575
6
14.3
6
73
14
68
52
1
4
41
1.30
8507--8584
17
4.4
18
87
7
115
55
1
3
39
1.26
8507--8584
36
2.2
35
90
6
122
55
1
3
39
1.26
9659--9893
45
5.2
45
79
7
264
12
15
28
43
1.82
9659--9902
90
2.7
90
92
4
404
12
15
28
43
1.83
16892--16924
17
1.9
17
93
0
57
45
3
0
51
1.16
16892--17002
11
9.5
12
70
13
79
43
2
2
51
1.30
16892--17002
6
19.0
6
69
12
79
43
2
2
51
1.30
16915--17000
17
4.9
17
81
8
93
40
2
3
53
1.31
18803--18862
29
2.1
29
87
6
86
35
28
3
33
1.74
18817--18947
60
2.2
61
81
10
139
33
25
3
36
1.74
18927--19044
60
2.0
61
83
5
150
27
20
8
44
1.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22545--22587
22
2.0
20
82
8
50
48
9
2
39
1.48
29193--29217
6
4.2
6
100
0
50
48
16
0
36
1.46
44418--44453
6
6.0
6
86
0
54
33
0
66
0
0.92
44418--44456
18
2.1
19
90
4
62
33
0
66
0
0.92
54374--54411
18
2.1
18
90
0
58
81
2
2
13
0.90
55258--55304
17
2.7
17
81
18
53
48
8
2
40
1.45
57655--57727
30
2.4
29
80
14
78
53
6
1
38
1.36
58399--58427
2
14.5
2
100
0
58
51
0
0
48
1.00
63916--63951
18
2.0
18
100
0
72
16
11
0
72
1.12
64149--64229
11
7.0
12
72
12
62
40
1
1
56
1.15
64161--64230
6
12.0
6
77
11
65
44
1
1
52
1.18
64154--64224
17
4.1
17
85
1
97
42
1
1
54
1.17
65006--65127
3
39.0
3
82
8
145
59
3
3
33
1.30
66078--66237
30
5.4
29
77
8
153
37
27
3
31
1.74
66085--66266
59
3.1
59
80
5
206
36
28
3
30
1.75
70984--71502
205
2.6
199
90
3
797
35
20
23
21
1.96
71817--71897
11
7.3
11
77
12
76
39
2
1
56
1.20
71827--71907
6
14.0
6
74
17
73
44
2
1
51
1.22
71817--71906
17
5.3
16
82
7
99
42
2
1
54
1.20
72682--72807
3
39.0
3
75
10
90
54
6
4
34
1.47
72709--72790
31
2.7
31
96
1
148
50
9
7
32
1.63
72682--72807
31
3.9
30
69
19
76
54
6
4
34
1.47
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74910--74999
9
10.7
9
70
22
63
51
1
0
47
1.08
74910--74999
37
2.4
38
89
9
132
51
1
0
47
1.08
75552--75586
6
5.7
6
86
6
52
0
60
0
40
0.97
75999--76066
16
4.6
14
75
20
59
45
0
0
54
0.99
75999--76070
30
2.4
30
93
2
128
45
0
0
54
0.99
76017--76066
13
3.5
13
80
19
64
48
0
0
52
1.00
84043--84101
11
5.3
11
74
11
57
42
0
3
54
1.17
84044--84103
17
3.5
17
80
8
68
43
0
3
53
1.17
84043--84117
6
13.0
6
77
13
68
42
0
2
54
1.14
84044--84113
23
3.1
23
79
6
63
41
0
2
55
1.14
84029--84117
29
3.2
28
85
7
110
41
0
2
56
1.12
85673--85891
30
7.4
30
78
12
163
34
25
5
33
1.80
85673--85983
29
10.8
30
74
14
203
33
26
6
33
1.83
85673--85890
59
3.7
58
77
14
162
34
25
5
33
1.80
103724--103768
22
2.0
22
83
8
56
57
4
2
35
1.31
103921--103980
21
2.7
22
73
19
54
36
0
1
61
1.06
113620--113666
16
2.8
17
77
9
60
63
0
2
34
1.06
125604--125758
61
2.6
61
83
5
199
28
19
14
37
1.91
126593--126710
30
3.9
30
86
2
166
61
4
7
27
1.42
127912--128018
34
3.3
29
78
17
97
60
3
6
28
1.39
129202--129616
93
4.5
93
92
1
665
47
2
5
44
1.42
129608--129645
11
3.5
11
85
7
51
44
0
5
50
1.24
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
129735--129769
17
2.1
16
89
5
52
37
8
2
51
1.47

Tables:   1

The End!