Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009610.1 Kokia drynarioides strain JFW-HI SEQ_124326, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  86403

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
323--372
16
3.2
16
71
21
52
60
6
0
34
1.21
1650--1743
43
2.2
42
83
5
109
32
10
8
47
1.68
2302--2438
45
3.0
45
78
0
130
31
26
20
21
1.98
2687--2760
14
5.4
13
79
9
67
48
22
2
25
1.64
2682--2771
27
3.3
27
77
3
81
48
23
3
24
1.66
6054--6105
4
12.8
4
87
4
77
0
28
0
71
0.87
12265--12318
16
3.1
16
77
17
54
72
5
1
20
1.14
12271--12331
21
3.0
21
73
24
58
73
3
3
19
1.11
12438--12480
16
2.8
16
82
3
52
76
6
2
13
1.08
13388--13581
97
2.0
98
82
1
237
18
18
20
43
1.88
13496--14251
49
15.4
49
75
2
408
21
22
15
40
1.90
13494--14109
147
4.2
146
78
5
526
21
22
14
41
1.90
13564--14207
147
4.4
149
78
6
564
20
22
15
40
1.90
15234--15275
13
3.1
13
83
16
50
0
16
2
80
0.81
15230--15271
21
2.1
20
86
8
59
0
11
2
85
0.68
21726--22369
195
3.3
195
84
1
819
29
17
25
27
1.97
28794--28828
18
1.9
18
88
0
52
28
11
17
42
1.83
30898--31079
42
4.3
42
84
2
211
34
9
28
27
1.89
35488--35515
2
14.0
2
100
0
56
50
0
50
0
1.00
40710--40744
11
3.2
11
87
0
52
37
0
2
60
1.12
43061--43127
19
3.2
20
79
16
75
38
1
4
55
1.29
43959--44001
9
4.7
9
78
16
52
32
0
2
65
1.06
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44495--44542
19
2.4
21
82
10
64
64
2
2
31
1.16
53630--53683
28
1.9
28
88
0
81
27
7
14
50
1.70
56614--56706
36
2.7
34
81
3
96
44
13
9
32
1.77
63253--63655
82
4.9
82
86
1
493
32
23
17
26
1.97
64619--64645
3
9.0
3
100
0
54
0
33
0
66
0.92
76991--77020
15
2.0
15
100
0
60
40
13
20
26
1.89
77552--77598
24
2.0
24
83
8
60
51
2
6
40
1.39
80955--80984
16
1.9
16
93
6
53
0
13
0
86
0.57
80953--80985
17
1.9
17
93
0
57
0
12
0
87
0.53
84340--84549
107
2.0
107
93
0
357
30
23
15
30
1.95

Tables:   1

The End!