Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009620.1 Kokia drynarioides strain JFW-HI SEQ_124336, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  106133

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
180--208
11
2.6
11
100
0
58
10
13
6
68
1.37
177--209
11
2.8
12
86
13
50
12
12
9
66
1.44
421--491
32
2.2
32
100
0
142
35
5
5
53
1.48
10316--10354
18
2.1
18
85
4
51
51
0
5
43
1.24
10465--10520
29
1.9
29
82
7
69
19
10
7
62
1.50
14852--14906
25
2.2
25
81
12
60
47
0
5
47
1.25
38365--38398
2
17.5
2
93
6
61
50
0
0
50
1.00
39065--39111
19
2.5
19
85
0
67
27
2
0
70
0.99
40073--40118
22
2.2
20
84
7
56
17
6
4
71
1.24
40501--40548
16
3.0
16
81
0
60
31
20
2
45
1.63
41644--41694
25
2.0
25
96
0
93
27
27
11
33
1.92
57114--57186
34
2.2
33
83
11
87
38
2
2
56
1.28
65971--65998
12
2.3
12
100
0
56
39
17
10
32
1.84
67856--67958
42
2.4
43
80
3
120
30
41
11
16
1.84
68412--68468
29
2.0
29
92
0
96
47
1
3
47
1.29
68397--68458
24
2.5
24
76
23
58
48
6
0
45
1.28
78653--78749
20
4.8
21
78
8
112
37
29
17
15
1.91
85014--85106
20
4.6
21
82
9
113
38
29
16
16
1.90
85599--85631
13
2.6
13
90
4
50
27
0
9
63
1.24
87489--87517
6
4.8
6
100
0
58
17
34
17
31
1.93
87983--88163
88
2.0
89
97
1
346
33
17
8
40
1.81
88946--88978
2
16.5
2
100
0
66
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
90776--90815
21
1.9
21
85
10
55
5
37
12
45
1.64
93019--93086
31
2.2
31
82
12
86
26
19
4
50
1.66
96997--97030
15
2.3
15
89
0
50
32
0
0
67
0.91
99361--99471
48
2.2
46
75
20
91
68
1
2
27
1.13
99414--99455
20
2.2
20
86
4
59
71
2
4
21
1.16
99421--99464
20
2.2
20
91
0
70
72
4
2
20
1.13
99735--99840
19
5.8
18
76
12
83
33
2
0
62
1.16
99744--99812
9
7.9
8
75
13
57
30
2
1
65
1.16
99734--99833
28
3.6
27
78
11
114
35
2
1
62
1.14
101708--101768
31
1.9
32
86
3
88
32
4
13
49
1.63
102137--102397
91
2.9
91
96
0
477
42
20
8
29
1.80
102334--102463
66
2.0
66
98
0
251
36
23
9
30
1.86
102243--102554
157
2.0
157
97
0
588
39
21
8
30
1.84
102400--102566
91
1.8
91
98
0
325
38
21
9
30
1.85
104739--105446
59
12.0
59
85
6
740
31
3
30
35
1.75
104783--105443
29
22.5
28
73
15
445
31
3
30
34
1.75

Tables:   1

The End!