Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009638.1 Kokia drynarioides strain JFW-HI SEQ_124355, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  139407

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4128--4252
56
2.2
56
82
2
153
28
15
41
14
1.86
20266--20314
20
2.5
20
87
12
66
26
8
0
65
1.20
20266--20326
20
3.1
19
76
19
54
27
8
0
63
1.22
20310--20376
30
2.2
30
84
10
84
38
1
1
58
1.17
20307--20376
31
2.3
30
82
7
88
40
1
1
57
1.17
21305--21359
22
2.5
21
76
5
56
56
0
1
41
1.10
21345--21414
30
2.3
31
83
11
92
54
4
1
40
1.29
21398--21431
15
2.2
16
89
5
52
64
0
2
32
1.08
21476--21524
25
2.0
25
95
0
89
36
18
2
42
1.62
22884--22927
23
2.0
22
86
4
61
29
6
2
61
1.34
33716--33763
25
1.9
25
82
0
60
29
0
6
64
1.18
40773--40804
13
2.3
15
89
10
50
59
18
3
18
1.51
56207--56281
26
2.9
25
79
15
80
30
0
4
65
1.11
56231--56287
27
2.1
27
83
6
71
33
0
3
63
1.12
57717--57755
21
1.9
19
85
10
51
17
10
10
61
1.55
60301--60354
20
2.8
18
78
15
56
33
20
27
18
1.96
65988--66056
6
11.5
6
85
0
84
46
1
30
21
1.60
65985--66056
30
2.4
30
97
0
135
47
1
29
22
1.60
65985--66068
12
5.5
16
68
28
58
47
1
27
23
1.59
65984--66068
24
3.6
24
84
3
102
48
1
27
23
1.58
68307--68343
19
1.9
19
89
10
58
37
2
5
54
1.38
71687--71730
15
2.9
15
77
12
54
36
0
0
63
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72041--72102
23
2.7
23
84
2
79
40
14
12
32
1.84
72959--73021
25
2.4
27
82
7
69
61
1
1
34
1.15
86797--87075
139
2.0
139
95
0
495
32
12
17
37
1.88
93635--93679
18
2.6
17
86
10
56
37
0
0
62
0.96
94532--94637
55
1.9
55
88
3
160
33
10
21
33
1.88
106675--106816
71
2.0
72
80
6
164
35
11
11
40
1.79
107040--107095
28
2.0
27
86
6
76
25
5
5
64
1.36
113374--113421
24
2.0
24
100
0
96
54
12
20
12
1.70
113870--113895
2
13.0
2
100
0
52
50
0
0
50
1.00
134013--134062
24
2.1
24
84
0
64
64
4
24
8
1.38

Tables:   1

The End!