Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009646.1 Kokia drynarioides strain JFW-HI SEQ_124364, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  115745

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
438--513
23
3.3
23
88
0
107
9
25
21
44
1.81
502--572
23
3.1
22
85
4
88
11
15
30
42
1.82
2276--2409
65
2.1
65
100
0
268
50
11
11
25
1.73
2279--2383
32
3.2
32
67
17
99
51
8
15
24
1.71
3740--3802
33
1.9
33
96
0
117
33
7
6
52
1.56
6732--6769
20
1.9
19
94
5
67
73
10
10
5
1.23
7099--7139
20
2.1
19
86
4
55
2
26
7
63
1.33
7456--7488
16
2.1
16
94
0
57
39
18
24
18
1.92
7698--7772
4
19.5
4
71
17
61
69
1
0
29
0.97
7713--7760
24
2.0
23
92
4
78
66
0
0
33
0.92
10674--10714
22
1.9
21
85
5
55
29
2
14
53
1.54
28133--28191
31
1.9
31
86
6
84
32
1
8
57
1.39
29293--29336
20
2.2
20
100
0
88
36
4
13
45
1.64
29293--29344
20
2.5
20
93
3
77
36
5
13
44
1.68
34444--34484
12
3.4
12
82
0
55
34
39
17
9
1.82
35455--35598
72
2.0
72
100
0
288
36
13
11
38
1.81
38456--38664
104
2.0
104
98
0
400
26
20
13
39
1.89
39641--39684
23
1.9
23
90
0
70
61
0
2
36
1.09
39645--39687
11
3.8
11
80
17
52
65
0
2
32
1.06
40258--40284
14
1.9
14
100
0
54
40
14
7
37
1.74
41533--41674
69
2.1
69
90
2
223
28
27
14
29
1.95
46312--46364
20
2.7
20
78
0
61
54
7
7
30
1.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47421--47489
11
6.4
11
75
8
52
69
10
4
15
1.32
63530--63579
20
2.5
21
77
9
59
12
20
0
68
1.21
66398--66616
110
2.0
110
95
0
395
39
17
11
31
1.86
67943--68026
23
3.8
21
76
13
71
67
5
0
26
1.13
67944--68014
23
3.1
22
78
9
72
67
5
0
26
1.12
73851--73876
5
5.2
5
100
0
52
19
57
0
23
1.40
75052--75091
16
2.5
17
81
18
50
65
0
2
32
1.06
75017--75076
31
2.0
31
83
3
77
56
1
0
41
1.09
75174--75488
168
1.8
170
83
8
417
43
7
10
38
1.68
75462--75519
30
1.9
30
82
6
73
51
3
3
41
1.35
85268--85306
16
2.4
16
87
8
53
43
15
0
41
1.46
85507--85547
22
2.0
20
85
9
55
51
0
2
46
1.14
85511--85552
22
2.0
21
81
9
50
52
0
2
45
1.13
85586--85633
16
3.1
15
88
11
71
47
0
0
52
1.00
85579--85641
16
4.2
15
84
13
69
46
0
0
53
1.00
88509--88577
35
2.0
35
85
5
95
11
4
18
65
1.41
88540--88564
11
2.3
11
100
0
50
8
0
24
68
1.16
88539--88599
24
2.6
22
76
16
61
6
1
19
72
1.16
88525--88633
35
3.2
33
82
10
105
8
2
18
70
1.24
88551--88646
12
8.2
12
70
12
58
8
2
18
70
1.22
88525--88628
32
3.1
32
84
6
109
8
2
18
70
1.26
88590--88655
23
2.8
24
75
13
64
10
1
19
68
1.27
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105523--105569
3
15.7
3
100
0
94
68
0
0
31
0.90
107015--107046
8
4.2
8
84
15
50
0
12
0
87
0.54
107015--107049
14
2.6
14
95
4
63
0
11
0
88
0.51

Tables:   1

The End!