Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009649.1 Kokia drynarioides strain JFW-HI SEQ_124367, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61900

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2741--2781
17
2.4
17
83
4
55
24
21
2
51
1.60
8752--8886
59
2.3
59
83
2
155
34
4
24
36
1.76
8780--8913
30
4.5
29
80
10
119
35
3
24
36
1.74
8780--9215
29
14.4
29
71
14
179
33
2
27
36
1.72
8899--9031
71
1.9
70
82
13
166
35
0
27
36
1.63
8962--9187
29
7.7
30
76
8
207
30
3
29
37
1.73
8869--9064
100
2.0
99
86
5
279
32
1
29
36
1.67
8922--9002
42
2.0
41
92
2
135
33
1
30
34
1.66
9918--9956
21
1.9
20
84
5
51
17
48
17
15
1.81
11099--11197
17
5.8
17
77
8
76
52
6
5
36
1.48
11459--11506
24
2.0
24
87
0
69
20
31
0
47
1.50
16987--17024
18
2.1
19
85
5
51
55
5
31
7
1.51
25933--25971
20
2.0
20
84
0
51
43
23
0
33
1.54
28449--28477
10
2.9
10
100
0
58
51
10
37
0
1.36
34088--34161
39
1.9
37
89
5
112
44
12
25
17
1.83
45073--45153
41
2.0
41
85
7
110
37
2
6
54
1.39
48406--48430
2
12.5
2
100
0
50
52
48
0
0
1.00
50328--50382
27
2.0
27
82
6
67
38
10
5
45
1.63
60736--60765
10
2.8
11
90
10
53
66
6
0
26
1.16
61139--61176
20
1.9
20
84
10
51
39
0
13
47
1.42
61362--61540
22
8.1
22
79
6
191
8
20
25
45
1.80
61363--61525
42
3.7
43
81
5
157
8
20
24
46
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61544--61598
25
2.2
25
90
0
83
10
29
16
43
1.82
61733--61815
6
14.2
6
71
14
66
42
2
3
51
1.32
61733--61815
17
4.8
16
78
12
85
42
2
3
51
1.32
61724--61801
36
2.2
35
88
6
113
39
2
3
53
1.33

Tables:   1

The End!