Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009668.1 Kokia drynarioides strain JFW-HI SEQ_124386, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84402

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
110--142
4
8.5
4
90
6
50
0
27
0
72
0.85
83--137
19
2.9
19
76
7
58
0
32
1
65
1.03
272--299
2
14.0
2
100
0
56
50
50
0
0
1.00
1041--1069
8
3.6
8
100
0
58
27
0
0
72
0.85
1177--1260
38
2.2
39
83
14
104
57
1
0
41
1.06
2694--2735
22
2.0
22
90
4
68
33
0
4
61
1.17
2757--2821
34
1.9
34
84
6
87
46
16
3
33
1.63
2895--2963
29
2.3
30
80
11
81
37
0
8
53
1.32
4570--4609
20
2.1
20
86
9
57
45
2
20
32
1.64
5770--5926
39
4.0
39
100
0
314
54
5
7
33
1.51
15967--16038
24
3.0
24
83
4
83
18
33
2
45
1.63
18139--18242
34
3.1
34
91
0
172
16
37
3
42
1.66
18139--18190
17
3.1
17
69
20
54
17
34
3
44
1.67
18150--18241
17
5.4
17
67
23
59
17
36
3
42
1.66
18417--18470
28
1.9
28
85
7
74
55
5
1
37
1.34
20391--20459
31
2.2
32
84
2
86
60
7
7
24
1.48
22314--22384
36
2.0
36
97
0
133
45
12
14
28
1.81
26411--26450
19
2.1
19
85
4
53
60
5
0
35
1.19
26413--26454
17
2.6
16
85
7
57
61
2
0
35
1.09
27132--27175
23
1.9
24
86
9
65
36
6
0
56
1.26
36034--36116
30
2.7
30
76
7
87
40
8
8
42
1.65
47960--47991
3
10.7
3
93
0
55
28
34
3
34
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48506--48552
3
15.7
3
100
0
94
0
31
0
68
0.90
56833--56869
6
6.2
6
100
0
74
16
0
51
32
1.45
57553--57620
29
2.3
30
79
5
75
39
8
13
38
1.75
58239--58311
38
1.9
38
88
0
110
42
10
12
34
1.78
62146--62170
7
3.6
7
100
0
50
40
0
60
0
0.97
62751--62782
2
16.0
2
100
0
64
50
0
0
50
1.00
72229--72443
113
1.9
113
92
1
360
42
8
18
30
1.80
72452--72491
20
2.0
20
95
0
71
52
0
42
5
1.23
79433--79457
13
1.9
13
100
0
50
36
0
0
64
0.94
81138--81171
17
1.9
17
88
5
50
79
0
0
20
0.73
83639--83684
18
2.5
19
86
6
60
60
0
39
0
0.97
84033--84075
21
2.1
21
91
4
70
27
2
13
55
1.51
84176--84210
16
2.2
16
100
0
70
45
0
5
48
1.26

Tables:   1

The End!