Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009669.1 Kokia drynarioides strain JFW-HI SEQ_124387, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40552

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
663--715
22
2.4
22
93
0
88
39
24
9
26
1.86
1151--1257
22
4.8
22
80
6
135
7
7
20
64
1.44
1151--1282
22
5.9
22
78
7
131
9
6
18
65
1.42
1151--1283
45
3.0
43
82
7
167
9
6
18
65
1.44
1219--1316
24
4.1
24
81
6
101
12
6
14
67
1.40
1219--1292
23
3.2
23
79
11
87
13
5
12
68
1.36
7070--7178
49
2.3
46
76
10
112
34
9
11
44
1.72
8716--8751
19
1.9
18
88
5
54
55
22
0
22
1.44
12245--12311
6
11.3
6
78
9
75
43
1
0
55
1.09
12231--12316
17
4.8
18
83
8
104
41
2
2
53
1.26
12231--12316
36
2.4
35
86
3
118
41
2
2
53
1.26
12248--12325
17
4.5
17
85
6
93
46
2
1
50
1.23
12288--12336
17
2.9
17
81
3
55
53
2
2
42
1.24
12678--12808
29
4.5
29
82
7
131
38
24
3
32
1.73
12678--12808
59
2.2
58
81
11
144
38
24
3
32
1.73
12649--12868
29
7.6
28
72
14
101
36
24
5
34
1.77
24024--24643
205
3.0
204
84
5
778
36
19
21
23
1.95
25099--25165
6
11.3
6
71
9
57
40
4
1
53
1.30
25098--25150
19
2.9
19
83
8
74
35
5
1
56
1.34
25099--25165
17
3.8
17
84
4
80
40
4
1
53
1.30
25122--25179
17
3.4
17
80
4
64
46
3
3
46
1.36
25122--25190
33
2.1
34
83
8
88
49
2
2
44
1.32
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25142--25190
17
2.9
17
81
3
55
53
2
2
42
1.24
25527--25776
30
8.6
28
81
8
245
35
27
3
34
1.73
25520--25839
59
5.5
58
81
6
296
35
27
3
34
1.73
25527--25755
87
2.6
87
84
4
291
35
28
3
33
1.73
25520--25838
58
5.5
58
79
10
275
35
27
3
34
1.73
25528--25834
29
10.6
28
74
13
144
35
26
3
34
1.73
28646--28715
36
1.9
36
88
0
104
47
22
17
12
1.81
30940--30974
14
2.5
15
86
13
56
68
5
0
25
1.11
30801--31668
436
2.0
437
79
8
958
38
11
10
39
1.75

Tables:   1

The End!