Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009674.1 Kokia drynarioides strain JFW-HI SEQ_124392, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83509

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
286--322
18
2.1
18
94
0
65
51
0
24
24
1.49
286--322
12
3.1
12
84
0
56
51
0
24
24
1.49
1096--1204
45
2.5
43
78
14
111
46
0
12
39
1.48
7365--7400
18
2.1
18
89
5
56
41
0
25
33
1.55
7697--7733
18
2.1
18
89
0
56
48
0
27
24
1.51
11150--11333
36
5.1
36
89
0
253
34
12
27
26
1.92
14846--14880
18
1.9
19
88
11
56
62
2
0
34
1.10
16415--16475
24
2.5
24
83
0
77
49
9
13
27
1.73
18383--18449
24
2.8
24
81
2
80
55
7
10
26
1.60
21018--21157
68
2.0
69
84
1
183
34
8
15
42
1.77
35457--35538
7
11.6
7
76
17
64
76
1
0
21
0.85
35466--35543
23
3.4
23
82
12
106
74
2
0
23
0.94
35467--35543
16
5.0
15
82
9
93
74
2
0
23
0.95
38212--38246
11
3.2
11
87
0
52
48
5
11
34
1.63
51289--51576
157
1.8
158
83
5
386
33
25
15
25
1.95
51292--51598
79
3.9
80
81
7
306
34
23
16
25
1.95
53152--53233
34
2.4
34
95
0
146
12
23
24
40
1.88
55152--55272
38
3.2
37
83
3
161
38
9
20
31
1.84
63939--64152
78
2.7
78
78
1
194
34
11
10
43
1.74
66207--66274
25
2.7
25
95
0
118
39
22
10
27
1.86
71079--71230
70
2.2
70
93
0
259
28
15
21
34
1.93
71950--72186
52
4.6
51
83
3
285
30
24
14
30
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71950--72186
104
2.3
103
86
5
316
30
24
14
30
1.95
76064--76165
25
4.0
25
88
1
141
35
29
12
22
1.91
80886--80949
24
2.7
24
85
0
92
25
14
12
48
1.78
82842--82892
24
2.1
24
88
0
75
23
9
7
58
1.56
83481--83509
2
14.5
2
100
0
58
51
0
0
48
1.00

Tables:   1

The End!