Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009678.1 Kokia drynarioides strain JFW-HI SEQ_124396, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  137967

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1367--1401
16
2.2
16
89
0
52
25
2
2
68
1.17
1611--1681
29
2.4
29
100
0
142
30
5
2
60
1.34
4605--4655
27
2.0
25
84
7
66
62
7
3
25
1.40
7554--7602
22
2.2
22
85
0
71
36
2
0
61
1.08
11661--11689
3
9.7
3
100
0
58
31
0
0
68
0.89
12962--13013
26
1.9
28
88
7
81
34
0
1
63
1.06
12962--13020
26
2.3
25
83
13
68
32
0
1
66
1.02
23338--23399
9
6.7
9
73
14
54
35
3
0
61
1.12
23338--23392
20
2.8
19
76
13
58
38
1
0
60
1.08
23315--23403
46
1.9
45
82
8
108
35
3
0
60
1.13
23341--23404
19
3.6
16
76
21
56
35
3
0
60
1.12
23370--23404
17
2.1
17
89
5
54
31
5
0
62
1.18
23617--23660
20
2.2
20
88
4
63
34
4
6
54
1.47
24957--24986
3
10.0
3
92
0
51
3
33
0
63
1.11
34011--34054
22
2.0
23
81
4
54
56
0
2
40
1.11
34012--34042
15
2.0
16
93
6
55
61
0
0
38
0.96
38185--38226
12
3.6
12
77
6
50
40
21
14
23
1.90
38161--38249
23
3.8
23
82
4
90
39
19
12
29
1.88
38161--38249
47
1.9
46
86
6
126
39
19
12
29
1.88
38337--38381
24
1.9
24
86
4
65
55
13
11
20
1.68
41215--41490
92
3.0
92
96
0
507
16
12
15
54
1.71
47713--47744
16
2.0
16
93
0
55
37
3
6
53
1.42
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49608--49641
2
17.0
2
87
0
50
0
50
0
50
1.00
54889--54965
18
4.4
17
68
22
52
38
0
1
59
1.06
55049--55087
18
2.2
18
86
4
53
53
7
0
38
1.30
69125--69158
11
3.1
11
86
0
50
88
8
0
2
0.62
97040--97094
23
2.4
22
81
9
65
65
0
0
34
0.93
107097--107127
16
1.9
16
93
0
53
22
3
3
70
1.16
110640--110697
29
2.0
30
82
3
73
62
0
5
32
1.18
111122--111169
22
2.3
22
85
7
64
27
2
4
66
1.21
134131--134186
19
2.9
18
77
15
58
53
1
1
42
1.21
135573--135650
38
2.1
38
100
0
156
23
23
2
51
1.61

Tables:   1

The End!