Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009687.1 Kokia drynarioides strain JFW-HI SEQ_124405, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67151

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
436--531
48
2.0
48
95
0
174
28
20
2
48
1.61
891--917
6
4.5
6
100
0
54
48
37
14
0
1.45
3782--3825
3
14.7
3
100
0
88
0
31
0
68
0.90
6639--6671
12
2.6
13
90
4
50
39
0
0
60
0.97
6713--6760
21
2.4
20
80
10
62
66
6
0
27
1.15
9303--9347
11
4.1
11
82
8
56
26
0
2
71
0.98
9299--9347
20
2.3
21
89
6
73
30
0
2
67
1.02
9311--9349
21
1.9
21
89
5
62
30
0
0
69
0.89
12938--12972
11
3.1
11
84
8
52
28
0
2
68
1.04
14218--14243
3
8.7
3
100
0
52
0
0
30
69
0.89
15143--15170
2
14.0
2
100
0
56
50
0
0
50
1.00
15506--15569
29
2.2
30
85
2
85
39
4
0
56
1.20
15522--15564
23
1.9
22
85
4
59
32
6
0
60
1.23
15522--15564
22
1.9
22
86
13
61
32
6
0
60
1.23
15513--15579
30
2.3
27
74
18
64
37
4
1
56
1.29
27002--27139
57
2.4
56
80
8
136
40
10
15
33
1.81
27799--27844
14
3.4
14
79
14
51
43
0
0
56
0.99
28994--29041
25
1.9
25
86
0
69
58
4
0
37
1.18
48899--49179
145
1.9
145
91
0
465
35
19
21
22
1.96
49044--50148
206
5.5
199
84
5
1354
35
19
22
21
1.96
50522--50608
6
14.5
6
72
13
72
39
3
1
56
1.24
50522--50587
17
3.6
17
89
8
87
39
3
0
57
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50522--50591
37
1.9
35
88
5
104
40
2
0
57
1.14
50577--50619
17
2.5
17
85
7
61
41
2
4
51
1.35
51302--51366
21
2.9
22
82
11
62
50
3
3
43
1.33
52375--52475
28
3.5
28
82
15
118
36
23
2
36
1.70
52376--52562
29
6.5
29
70
20
119
34
24
5
35
1.78
52371--52562
58
3.4
57
80
7
212
33
25
5
35
1.80
52520--52659
59
2.4
60
76
9
146
32
23
5
38
1.77
52633--52698
29
2.3
29
86
7
98
34
30
6
28
1.81
60324--60458
68
2.0
68
95
0
243
33
29
12
24
1.92
62686--62721
18
1.9
19
88
5
56
61
0
0
38
0.96
63597--63643
21
2.2
22
84
3
60
59
12
0
27
1.34
66355--66514
73
2.2
73
90
0
248
38
12
12
36
1.81

Tables:   1

The End!