Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009703.1 Kokia drynarioides strain JFW-HI SEQ_124422, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70564

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2577--2632
26
2.2
26
83
0
67
58
7
1
32
1.35
12046--12108
17
3.7
17
86
0
81
39
0
4
55
1.21
12043--12112
34
2.1
33
86
2
95
42
0
4
52
1.20
12785--12811
3
9.0
3
100
0
54
66
0
0
33
0.92
13883--14151
29
9.3
29
72
13
171
33
23
4
38
1.75
13883--14182
58
5.2
58
77
9
272
34
23
4
38
1.73
13883--14151
87
3.1
84
77
14
255
33
23
4
38
1.75
13954--14202
29
8.5
28
73
13
146
35
23
2
38
1.70
16862--16890
6
4.8
6
100
0
58
48
0
34
17
1.47
18955--19118
30
5.6
29
76
13
165
33
5
26
34
1.80
18943--19117
59
3.0
59
93
1
298
32
6
28
33
1.82
20403--20517
58
2.0
58
91
0
185
20
14
10
53
1.70
21090--21624
208
2.6
206
82
5
612
22
20
18
38
1.93
33644--33822
29
6.1
30
69
17
83
33
7
26
32
1.84
33625--33791
28
5.8
29
73
14
121
32
8
27
31
1.86
33644--33822
59
3.1
58
86
8
256
33
7
26
32
1.84
34525--34559
17
2.1
17
88
0
52
14
2
8
74
1.17
35511--35589
17
4.7
16
75
7
68
56
3
1
37
1.25
35534--35568
16
2.1
17
89
5
54
60
0
0
40
0.97
35511--35589
34
2.3
34
78
4
88
56
3
1
37
1.25
36912--36936
3
8.3
3
100
0
50
68
0
0
32
0.90
57236--57426
39
4.9
39
85
1
213
23
18
20
37
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57812--57959
72
2.1
72
87
2
208
28
29
18
23
1.98
59944--59996
21
2.5
21
84
0
79
20
9
18
50
1.74
60875--60940
29
2.2
29
86
5
87
30
12
19
37
1.88
66589--66670
24
3.4
24
91
0
128
51
6
12
30
1.63
70262--70288
12
2.2
12
100
0
54
25
22
0
51
1.48

Tables:   1

The End!