Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NTFQ01009726.1 Kokia drynarioides strain JFW-HI SEQ_124445, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 3173
ACGTcount: A:0.28, C:0.18, G:0.14, T:0.40
Found at i:931 original size:216 final size:214
Alignment explanation
Indices: 1--3173 Score: 3226
Period size: 216 Copynumber: 14.7 Consensus size: 214
* * * * * * *
1 CATTTTGTAAATAACTTTTGGTCTTTAAATTAAAATCTTATTGACGTGAGAATTGTTCCTCTCTT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTCTT
* * * ** * * * * *
66 TGTTCTTGGACAAACTTTCGAACTTGATGAAGTTTTGCAAGTTCGTT-TAAAACTTCAGTTCCTT
66 GGTTCTTGGACGAACTTCCGAACTTGACAAACTTTTACGAGTTC-TTCTATAACTTCGGTTCCTT
* * * * *** *
130 AAAATATTCATGACAATCCATTCCTTCGAGCAATTTTCCGAGCATTCCATGCACAACAGATCGCA
130 AAAGTATTCATGACAATCCATTCCTTCGAGCAATTTT-TGAACATTCCATGCTCGGGAAATCGCA
* *
195 TCATTTTATCTAAATAGTTTGG
194 TCA-TTTGTCTAAATAGTTTGT
** * * *
217 CATTTGGTAAACAACTTTTGGTCTTTGAATTAAAAACCTATTTACGTGAGAGTTTTTTTTTCTCT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAG-TTGTTTCTCTCT
* * * * * * *
282 TCGTTCTTAGATGAACTTCCAAACTTGACGAACTTTTACGAGTTCTTCAATAACTTCGGTTTCTT
65 TGGTTCTTGGACGAACTTCCGAACTTGACAAACTTTTACGAGTTCTTCTATAACTTCGGTTCCTT
* * * * * *
347 AAAGTATTAAGGACAA-CACATT-CTTAGAGCAATTTTTGAACATTACATACTCGGGAAATCACA
130 AAAGTATTCATGACAATC-CATTCCTTCGAGCAATTTTTGAACATTCCATGCTCGGGAAATCGCA
*
410 TCATTTGGTCTAAATACTTTGT
194 TCATTT-GTCTAAATAGTTTGT
* * * *
432 CATTTTCTAAACTACTTTTGGTCTTTGAATGAAAAACTT-TCTTATGTGAGAGTTGTTTCTATCT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACTTAT-TTACGTGAGAGTTGTTTCTCTCT
* * * * **
496 TGGTTCTTGGACGAACTTCCGAACTTGGCAAGCTTTTACGAGTTCTTTTATAACTTCAGTTCAAT
65 TGGTTCTTGGACGAACTTCCGAACTTGACAAACTTTTACGAGTTCTTCTATAACTTCGGTTCCTT
* ** * * **
561 AAAGTATTCATGACGATCCATTCCTTAAAGAAATTTTTCGAAAATTTAATGCGT-GGGAAATCGC
130 AAAGTATTCATGACAATCCATTCCTTCGAGCAATTTTT-GAACATTCCATGC-TCGGGAAATCGC
*
625 ATCATTTTTTTTCTAAACTA-TTTGT
193 ATCA---TTTGTCTAAA-TAGTTTGT
** * * * * *
650 CATTTGGTAAGCAACTTTTGGGCTTTGAATGAAAAACTTATTTACATGAGAATTGTTTCTCTCTT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTCTT
* * * ** * * * *
715 GGATATTGGATGAACTTCTAAACTTGATAAACTTTGACGACTTCTTCTATAACTTCGGTTCTTTA
66 GGTTCTTGGACGAACTTCCGAACTTGACAAACTTTTACGAGTTCTTCTATAACTTCGGTTCCTTA
* * * * * *
780 AAGTTTTCACGACGATCTATTCCTTCGAGCAATTTTCTGAACATTCCATGCTAGGGAAATCACAT
131 AAGTATTCATGACAATCCATTCCTTCGAGCAATTTT-TGAACATTCCATGCTCGGGAAATCGCAT
**
845 CATCTTGTCTACTTAGTTTGT
195 CAT-TTGTCTAAATAGTTTGT
** * * * *
866 CATTTGGTATACAACTTTTGGTCATTT-AATTAAAAACTTATTTACGTGAAAATT-TATTATCTC
1 CATTTTCTAAACAACTTTTGGTC-TTTGAATTAAAAACTTATTTACGTGAGAGTTGT-TTCTCTC
* * * * * * * * * * *
929 TTGGATCATGGACAAACTTCCTAACTTCACAAAATTTTACCAGTTGTTCTGTAACTTTGGTTCAT
64 TTGGTTCTTGGACGAACTTCCGAACTTGACAAACTTTTACGAGTTCTTCTATAACTTCGGTTCCT
* ** * *
994 TAAGGTATTCATGACAATCCCCTCCTTCGAGTAATTTTTTTAACATTCCATGCTCGGGAAATCGC
129 TAAAGTATTCATGACAATCCATTCCTTCGAGCAA-TTTTTGAACATTCCATGCTCGGGAAATCGC
1059 ATCATTTGTTCTAAATAGTTTGT
193 ATCATTTG-TCTAAATAGTTTGT
* * * *
1082 CATTTTGTAAACAACTTTTGGT-TTATAAATTAAAAAGTTATTTATGTGAGAGTT-TTTCTCTCT
1 CATTTTCTAAACAACTTTTGGTCTT-TGAATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTC-
* * * *
1145 TTGG-TCTTGGACGAACTTCCGAACTTGACGAAGTTTTACGAGTTCATT-TAAAACTTCAGTTCC
64 TTGGTTCTTGGACGAACTTCCGAACTTGACAAACTTTTACGAGTTC-TTCTATAACTTCGGTTCC
* ** * *
1208 TTAAAGTATTCATGA-AGATTCATTCCTTCGAGCAATTTTCCCAACATTCCAAGCACGGGAAATC
128 TTAAAGTATTCATGACA-ATCCATTCCTTCGAGCAATTTT-TGAACATTCCATGCTCGGGAAATC
1272 GCATCATTATGTCTAAATAGTTTGT
191 GCATCATT-TGTCTAAATAGTTTGT
* * * * * * *
1297 CCTTTTCTAAACAACTTTTGGTCCTTGAATTTAAAACCTATTTATGTGAGAATTGTTTCTCTTTT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTCTT
* * * * * * * * * * * *
1362 GGCTCTTAGATGAACTTCCAAACTAGACATACTTTTATGGGTTCTTCTATAACTTTGATTTCTTC
66 GGTTCTTGGACGAACTTCCGAACTTGACAAACTTTTACGAGTTCTTCTATAACTTCGGTTCCTTA
* * *
1427 AAGTATTCAAGACAATCCATTCCTTAGAGCAATTTTTTGAACATTCCATGCTCGAGAAATCGCAT
131 AAGTATTCATGACAATCCATTCCTTCGAGCAA-TTTTTGAACATTCCATGCTCGGGAAATCGCAT
*
1492 CATTTGTTCTAAATACTTTGT
195 CATTTG-TCTAAATAGTTTGT
* * * *
1513 GATTTTCTAAACGACTTTTGGTCTTTGAATGAAAAACTTATTTACGTGAGAGTTTTTTCTCTCTT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTCTT
* * *
1578 GGTTCTTGGACGAACTTCTGAACTTGGAC-AACTTTTACCAGTTCATCTATAACATTC-GTTCCT
66 GGTTCTTGGACGAACTTCCGAACTT-GACAAACTTTTACGAGTTCTTCTATAAC-TTCGGTTCCT
* * * * *
1641 TAAAGTATACATGACAATCCATTCCTTCAAACAATTTTTCAAACATTCCATGCTCGGGAAAACGC
129 TAAAGTATTCATGACAATCCATTCCTTCGAGCAATTTTT-GAACATTCCATGCTCGGGAAATCGC
*
1706 ATCGTTTGATCTAAATAGTTTGT
193 ATCATTTG-TCTAAATAGTTTGT
* * * *
1729 CATTTTCTAAACAACTTTGGGTCTATAAATTAAAATCTTATTTACGTGAGAGTTGTTTCTCTCTT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTCTT
* * * * * * * * *
1794 TGTTCTTGGATGAACTTTCGAACTTGACGAAGTTTTACGAGTTCTTTTAAAAATTCAGTTCCTTA
66 GGTTCTTGGACGAACTTCCGAACTTGACAAACTTTTACGAGTTCTTCTATAACTTCGGTTCCTTA
** * * * * *
1859 AAGTATTCATGATGATTCATTCCTTCAAGCAATTTTTCGAACAATCCAAGCACGGGAAATCGCAT
131 AAGTATTCATGACAATCCATTCCTTCGAGCAATTTTT-GAACATTCCATGCTCGGGAAATCGCAT
1924 CATTATGTCTAAATAGTTTGT
195 CATT-TGTCTAAATAGTTTGT
* *
1945 CATTTTCTAAACAACTTTTGGTCTTTGAATT-AAAACCTATTTATGTGAGAGTTGTTTCTCTCTT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTCTT
* * * * * *
2009 GGTTCTTAGACGAACTTCCAAACTTGACATACTTTTACGAGTTCCTCTATAACTGT-GATTTCTT
66 GGTTCTTGGACGAACTTCCGAACTTGACAAACTTTTACGAGTTCTTCTATAACT-TCGGTTCCTT
* * * *
2073 AAAGTATTCAAGACAATCCATTCCTTAGAGTAATTTTTTGAACATTCCATACTCGGGAAATCGCA
130 AAAGTATTCATGACAATCCATTCCTTCGAGCAA-TTTTTGAACATTCCATGCTCGGGAAATCGCA
2138 TCATTTGGTCTAAATAGTTTGT
194 TCATTT-GTCTAAATAGTTTGT
* * * * *
2160 CATTTTGTAAACAACTTTTGGTCTTTAAATTAAAATCTTATTTATGTGAGAATTGTTTCTCTCTT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTCTT
* * * ** * * * * * *
2225 TGTTCTTGGACAAACTTCTGAACTTGATGAAGTTTCACAAGTTCTTTTAAAACTTCAGTTCCTTA
66 GGTTCTTGGACGAACTTCCGAACTTGACAAACTTTTACGAGTTCTTCTATAACTTCGGTTCCTTA
* * ** * * * * *
2290 AACTATTCATTATGATACATTCCTTCGAGCAATTTTTCGAACATTCCATACACGCGG-AATTGTA
131 AAGTATTCATGACAATCCATTCCTTCGAGCAATTTTT-GAACATTCCATGCTCG-GGAAATCGCA
* * *
2354 TCTTTTTGTTTAAATAGTTTTT
194 TC-ATTTGTCTAAATAGTTTGT
* * * *
2376 CATTTTCTAAACAACTATTGGTCTTTCAATTAAAAACCTATTTACGTGAGAGTTGTTTTTCTCTT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTCTT
* * * * **
2441 GGTTCTTAGG-TGAACTTCCAAACTTGACGAACTTTTACGAGTTCTTCAATAACTTCGGTTTTTT
66 GGTTCTT-GGACGAACTTCCGAACTTGACAAACTTTTACGAGTTCTTCTATAACTTCGGTTCCTT
* * *
2505 AAAGTATTCAGGA-AATCCATTCCTTAGAGCAATTTTTTGAACATTCCATGCTCGGTAAATCGCA
130 AAAGTATTCATGACAATCCATTCCTTCGAGCAA-TTTTTGAACATTCCATGCTCGGGAAATCGCA
* **
2569 TCATTTGGTATAAATACATTGT
194 TCATTT-GTCTAAATAGTTTGT
* * * * *
2591 CATTTTCTAAACTACTTTTGGTCTTTGAATGAAAAACTTATTTACGTGATAGTTGTTTTTATCTT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTCTT
* * ** *
2656 GGTTCTTGGACGAACTTCCGAACTTGGCAAACTTTTACGAGTTCTTTTATAACTTAAGTTCCATA
66 GGTTCTTGGACGAACTTCCGAACTTGACAAACTTTTACGAGTTCTTCTATAACTTCGGTTCCTTA
* * * * *
2721 AAGTATTCATGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCAAGCACAGGAAATCGCTT
131 AAGTATTCATGACAATCCATTCCTTCGAGCAATTTTT-GAACATTCCATGCTCGGGAAATCGCAT
*
2786 CATTATGTCTAAATTGTTTGT
195 CATT-TGTCTAAATAGTTTGT
* * ** * *
2807 CATTTTCTAAACAACTGTTGCTCTTTGAATTAAATTCCTATTTATGTGAGAGTTGTTTCTCTCTT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTCTT
* * ** * * *
2872 GGTTCTTAGATGAACTAACAAACTTGA-AATACTTTTACGAGTTCTTCTATAACTTCGATTTCTT
66 GGTTCTTGGACGAACTTCCGAACTTGACAA-ACTTTTACGAGTTCTTCTATAACTTCGGTTCCTT
* ** * *
2936 AAAGTATTCAAGACAATCCATTCCTTAAAGTAATTTTTTGAACATTCCATTCTCGGGAAATCGCA
130 AAAGTATTCATGACAATCCATTCCTTCGAGCAA-TTTTTGAACATTCCATGCTCGGGAAATCGCA
3001 TCATTTGGTCTAAAT-GCTTTGT
194 TCATTT-GTCTAAATAG-TTTGT
** * * *
3023 CATTTTGAAAATAACTTTTGGTCTTTGAATGAAAAACTTATTTACGTAAGAGTTGTTTCTCTCTT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTCTT
* ** *
3088 GGTTCTTGGACAAACTTTTGAACTTGGA-AAACTTTTACGAGTTCATCTATAACTTTC-GTTCCT
66 GGTTCTTGGACGAACTTCCGAACTT-GACAAACTTTTACGAGTTCTTCTATAAC-TTCGGTTCCT
3151 TAAAGTATTCATGACAATCCATT
129 TAAAGTATTCATGACAATCCATT
Statistics
Matches: 2427, Mismatches: 466, Indels: 128
0.80 0.15 0.04
Matches are distributed among these distances:
214 96 0.04
215 637 0.26
216 1403 0.58
217 115 0.05
218 169 0.07
219 7 0.00
ACGTcount: A:0.28, C:0.18, G:0.14, T:0.40
Consensus pattern (214 bp):
CATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTCTT
GGTTCTTGGACGAACTTCCGAACTTGACAAACTTTTACGAGTTCTTCTATAACTTCGGTTCCTTA
AAGTATTCATGACAATCCATTCCTTCGAGCAATTTTTGAACATTCCATGCTCGGGAAATCGCATC
ATTTGTCTAAATAGTTTGT
Found at i:1295 original size:431 final size:431
Alignment explanation
Indices: 1--3173 Score: 3390
Period size: 431 Copynumber: 7.4 Consensus size: 431
* * * * * * *
1 CATTTTGTAAATAACTTTTGGTCTTTAAATTAAAATCTTATTGACGTGAGAATTGTTCCTCTCTT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTCTT
* * * ** * * * * * *
66 TGTTCTTGGACAAACTTTCGAACTTGATGAAGTTTTGCAAGTTCGTTTAAAACTTCAGTTCCTTA
66 GGTTCTTGGACGAACTTCCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCAGTTCATTA
* * * *** *
131 AAATATTCATGACAATCCATTCCTTCGAGCAATTTTCCGAGCATTCCATGCACAACAGATCGCAT
131 AAGTATTCATGACAATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCACGGGAAATCGCAT
* **
196 CATTT-TATCTAAATAGTTTGGCATTTGGTAAACAACTTTTGGTCTTTGAATTAAAAACCTATTT
196 CATTTGT-TCTAAATAGTTTGTCATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACCTATTT
* * * *
260 ACGTGAGAGTTTTTTTTTCTCTTCGTTCTTAGATGAACTTCCAAACTTGACGAACTTTTACGAGT
260 ACGTGAGAG-TTGTTTCTCTCTTGGTTCTTGGATGAACTTCCAAACTTGACGAACTTTTACGAGT
*
325 TCTTCAATAACTTCGGTTTCTTAAAGTATT-AAGGACAA-CACATT-CTTAGAGCAA-TTTTTGA
324 TCTT-TATAACTTCGGTTTCTTAAAGTATTCAA-GACAATC-CATTCCTTAGAGCAATTTTTTGA
* * * *
386 ACATTACATACTCGGGAAATCACATCATTTGGTCTAAATACTTTGT
386 ACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGT
* * * *
432 CATTTTCTAAACTACTTTTGGTCTTTGAATGAAAAACTT-TCTTATGTGAGAGTTGTTTCTATCT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACTTAT-TTACGTGAGAGTTGTTTCTCTCT
* * *
496 TGGTTCTTGGACGAACTTCCGAACTTGGCAAGCTTTTACGAGTTCTTTTATAACTTCAGTTCAAT
65 TGGTTCTTGGACGAACTTCCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCAGTTCATT
* ** * * ** **
561 AAAGTATTCATGACGATCCATTCCTTAAAGAAATTTTTCGAAAATTTAATGCGTGGGAAATCGCA
130 AAAGTATTCATGACAATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCACGGGAAATCGCA
* ** * * * *
626 TCATTTTTTTTCTAAACTA-TTTGTCATTTGGTAAGCAACTTTTGGGCTTTGAATGAAAAACTTA
195 TCA--TTTGTTCTAAA-TAGTTTGTCATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACCTA
* * * * * ** *
690 TTTACATGAGAATTGTTTCTCTCTTGGATATTGGATGAACTTCTAAACTTGATAAACTTTGACGA
257 TTTACGTGAGAGTTGTTTCTCTCTTGGTTCTTGGATGAACTTCCAAACTTGACGAACTTTTACGA
* * * * * * *
755 CTTCTTCTATAACTTCGG-TTCTTTAAAGTTTTCACGACGATCTATTCCTTCGAGCAATTTTCTG
322 GTTCTT-TATAACTTCGGTTTC-TTAAAGTATTCAAGACAATCCATTCCTTAGAGCAATTTTTTG
* * **
819 AACATTCCATGCTAGGGAAATCACATCATCTT-GTCTACTTAGTTTGT
385 AACATTCCATGCTCGGGAAATCGCATCAT-TTGGTCTAAATAGTTTGT
** * * * *
866 CATTTGGTATACAACTTTTGGTCATTT-AATTAAAAACTTATTTACGTGAAAATT-TATTATCTC
1 CATTTTCTAAACAACTTTTGGTC-TTTGAATTAAAAACTTATTTACGTGAGAGTTGT-TTCTCTC
* * * * * * * * * * **
929 TTGGATCATGGACAAACTTCCTAACTTCACAAAATTTTACCAGTTGTTCTGTAACTTTGGTTCAT
64 TTGGTTCTTGGACGAACTTCCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCAGTTCAT
* ** * ** *
994 TAAGGTATTCATGACAATCCCCTCCTTCGAGTAATTTTTTTAACATTCCATGCTCGGGAAATCGC
129 TAAAGTATTCATGACAATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCACGGGAAATCGC
* * **
1059 ATCATTTGTTCTAAATAGTTTGTCATTTTGTAAACAACTTTTGGT-TTATAAATTAAAAAGTTAT
194 ATCATTTGTTCTAAATAGTTTGTCATTTTCTAAACAACTTTTGGTCTT-TGAATTAAAAACCTAT
* * * *
1123 TTATGTGAGAGTT-TTTCTCTCTTTGG-TCTTGGACGAACTTCCGAACTTGACGAAGTTTTACGA
258 TTACGTGAGAGTTGTTTCTCTC-TTGGTTCTTGGATGAACTTCCAAACTTGACGAACTTTTACGA
* * * * * * ***
1186 GTTCATTTAAAACTTCAGTTCCTTAAAGTATTCATGA-AGATTCATTCCTTCGAGCAATTTTCCC
322 GTTC-TTTATAACTTCGGTTTCTTAAAGTATTCAAGACA-ATCCATTCCTTAGAGCAATTTTTTG
* *
1250 AACATTCCAAGCACGGGAAATCGCATCATTAT-GTCTAAATAGTTTGT
385 AACATTCCATGCTCGGGAAATCGCATCATT-TGGTCTAAATAGTTTGT
* * * * * * *
1297 CCTTTTCTAAACAACTTTTGGTCCTTGAATTTAAAACCTATTTATGTGAGAATTGTTTCTCTTTT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTCTT
* * * * * * * * * * *
1362 GGCTCTTAGATGAACTTCCAAACTAGACATACTTTTATGGGTTCTTCTATAACTTTGATTTC-TT
66 GGTTCTTGGACGAACTTCCGAACTTGACAAACTTTTACGAGTTCTTTTATAAC-TTCAGTTCATT
* * * * * *
1426 CAAGTATTCAAGACAATCCATTCCTTAGAGCAATTTTTTGAACATTCCATGCTCGAGAAATCGCA
130 AAAGTATTCATGACAATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCACGGGAAATCGCA
* * * * *
1491 TCATTTGTTCTAAATACTTTGTGATTTTCTAAACGACTTTTGGTCTTTGAATGAAAAACTTATTT
195 TCATTTGTTCTAAATAGTTTGTCATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACCTATTT
* * ** *
1556 ACGTGAGAGTTTTTTCTCTCTTGGTTCTTGGACGAACTTCTGAACTTGGAC-AACTTTTACCAGT
260 ACGTGAGAGTTGTTTCTCTCTTGGTTCTTGGATGAACTTCCAAACTT-GACGAACTTTTACGAGT
* * * * * **
1620 TCATCTATAACATTC-GTTCCTTAAAGTATACATGACAATCCATTCCTTCA-AACAATTTTTCAA
324 TC-TTTATAAC-TTCGGTTTCTTAAAGTATTCAAGACAATCCATTCCTT-AGAGCAATTTTTTGA
* * *
1683 ACATTCCATGCTCGGGAAAACGCATCGTTTGATCTAAATAGTTTGT
386 ACATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGT
* * * *
1729 CATTTTCTAAACAACTTTGGGTCTATAAATTAAAATCTTATTTACGTGAGAGTTGTTTCTCTCTT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTCTT
* * * * * * * *
1794 TGTTCTTGGATGAACTTTCGAACTTGACGAAGTTTTACGAGTTCTTTTAAAAATTCAGTTCCTTA
66 GGTTCTTGGACGAACTTCCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCAGTTCATTA
** * * * *
1859 AAGTATTCATGATGATTCATTCCTTCAAGCAATTTTTCGAACAATCCAAGCACGGGAAATCGCAT
131 AAGTATTCATGACAATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCACGGGAAATCGCAT
1924 CATTATG-TCTAAATAGTTTGTCATTTTCTAAACAACTTTTGGTCTTTGAATT-AAAACCTATTT
196 CATT-TGTTCTAAATAGTTTGTCATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACCTATTT
* * *
1987 ATGTGAGAGTTGTTTCTCTCTTGGTTCTTAGACGAACTTCCAAACTTGAC-ATACTTTTACGAGT
260 ACGTGAGAGTTGTTTCTCTCTTGGTTCTTGGATGAACTTCCAAACTTGACGA-ACTTTTACGAGT
* * *
2051 TCCTCTATAACTGT-GATTTCTTAAAGTATTCAAGACAATCCATTCCTTAGAGTAATTTTTTGAA
324 T-CTTTATAACT-TCGGTTTCTTAAAGTATTCAAGACAATCCATTCCTTAGAGCAATTTTTTGAA
*
2115 CATTCCATACTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGT
387 CATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGT
* * * * *
2160 CATTTTGTAAACAACTTTTGGTCTTTAAATTAAAATCTTATTTATGTGAGAATTGTTTCTCTCTT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTCTT
* * * ** * * * * *
2225 TGTTCTTGGACAAACTTCTGAACTTGATGAAGTTTCACAAGTTCTTTTAAAACTTCAGTTCCTTA
66 GGTTCTTGGACGAACTTCCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCAGTTCATTA
* * ** * * * *
2290 AACTATTCATTATGATACATTCCTTCGAGCAATTTTTCGAACATTCCATACACGCGG-AATTGTA
131 AAGTATTCATGACAATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCACG-GGAAATCGCA
* * * *
2354 TCTTTTTGTT-TAAATAGTTTTTCATTTTCTAAACAACTATTGGTCTTTCAATTAAAAACCTATT
195 TC-ATTTGTTCTAAATAGTTTGTCATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACCTATT
*
2418 TACGTGAGAGTTGTTTTTCTCTTGGTTCTTAGG-TGAACTTCCAAACTTGACGAACTTTTACGAG
259 TACGTGAGAGTTGTTTCTCTCTTGGTTCTT-GGATGAACTTCCAAACTTGACGAACTTTTACGAG
* * *
2482 TTCTTCAATAACTTCGGTTTTTTAAAGTATTCAGGA-AATCCATTCCTTAGAGCAATTTTTTGAA
323 TTCTT-TATAACTTCGGTTTCTTAAAGTATTCAAGACAATCCATTCCTTAGAGCAATTTTTTGAA
* * **
2546 CATTCCATGCTCGGTAAATCGCATCATTTGGTATAAATACATTGT
387 CATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGT
* * * * *
2591 CATTTTCTAAACTACTTTTGGTCTTTGAATGAAAAACTTATTTACGTGATAGTTGTTTTTATCTT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTCTT
* *
2656 GGTTCTTGGACGAACTTCCGAACTTGGCAAACTTTTACGAGTTCTTTTATAACTTAAGTTCCA-T
66 GGTTCTTGGACGAACTTCCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCAGTT-CATT
* * * *
2720 AAAGTATTCATGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCAAGCACAGGAAATCGCT
130 AAAGTATTCATGACAATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCACGGGAAATCGCA
* * * **
2785 TCATTATG-TCTAAATTGTTTGTCATTTTCTAAACAACTGTTGCTCTTTGAATTAAATTCCTATT
195 TCATT-TGTTCTAAATAGTTTGTCATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACCTATT
* * ** *
2849 TATGTGAGAGTTGTTTCTCTCTTGGTTCTTAGATGAACTAACAAACTTGA-AATACTTTTACGAG
259 TACGTGAGAGTTGTTTCTCTCTTGGTTCTTGGATGAACTTCCAAACTTGACGA-ACTTTTACGAG
* * *
2913 TTCTTCTATAACTTCGATTTCTTAAAGTATTCAAGACAATCCATTCCTTAAAGTAATTTTTTGAA
323 TTCTT-TATAACTTCGGTTTCTTAAAGTATTCAAGACAATCCATTCCTTAGAGCAATTTTTTGAA
*
2978 CATTCCATTCTCGGGAAATCGCATCATTTGGTCTAAAT-GCTTTGT
387 CATTCCATGCTCGGGAAATCGCATCATTTGGTCTAAATAG-TTTGT
** * * *
3023 CATTTTGAAAATAACTTTTGGTCTTTGAATGAAAAACTTATTTACGTAAGAGTTGTTTCTCTCTT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTCTT
* ** * * *
3088 GGTTCTTGGACAAACTTTTGAACTTGGA-AAACTTTTACGAGTTCATCTATAACTTTC-GTTCCT
66 GGTTCTTGGACGAACTTCCGAACTT-GACAAACTTTTACGAGTTCTTTTATAAC-TTCAGTTCAT
3151 TAAAGTATTCATGACAATCCATT
129 TAAAGTATTCATGACAATCCATT
Statistics
Matches: 2299, Mismatches: 385, Indels: 115
0.82 0.14 0.04
Matches are distributed among these distances:
430 17 0.01
431 1235 0.54
432 760 0.33
433 85 0.04
434 196 0.09
435 6 0.00
ACGTcount: A:0.28, C:0.18, G:0.14, T:0.40
Consensus pattern (431 bp):
CATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTCTT
GGTTCTTGGACGAACTTCCGAACTTGACAAACTTTTACGAGTTCTTTTATAACTTCAGTTCATTA
AAGTATTCATGACAATCCATTCCTTCGAGCAATTTTTCGAACATTCCATGCACGGGAAATCGCAT
CATTTGTTCTAAATAGTTTGTCATTTTCTAAACAACTTTTGGTCTTTGAATTAAAAACCTATTTA
CGTGAGAGTTGTTTCTCTCTTGGTTCTTGGATGAACTTCCAAACTTGACGAACTTTTACGAGTTC
TTTATAACTTCGGTTTCTTAAAGTATTCAAGACAATCCATTCCTTAGAGCAATTTTTTGAACATT
CCATGCTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGT
Found at i:1553 original size:647 final size:644
Alignment explanation
Indices: 1--3173 Score: 3290
Period size: 647 Copynumber: 4.9 Consensus size: 644
* * * * * * * *
1 CATTTTGTAAATAACTTTTGGTCTTTAAATTAAAATCTTATTGACGTGAGAATTGTTCCTCTCTT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATGAAAAACCTATTTACGTGAGAATTGTTTCTCTCTT
* * * * * ** * * * * * *
66 TGTTCTTGGACAAACTTTCGAACTTGATGAAGTTTTGCAAGTTCGTT-TAAAAC-TTCAGTTCCT
66 GGTTCTTAGACGAACTTCCAAACTTGACAAACTTTTACGAGTTC-TTCTATAACTTTGA-TTTCT
* * ** * * * * *
129 TAAAATATTCATGACAATCCATTCCTTCGAGCAATTTTCCGAGCATTCCATGCACAACAGATCGC
129 TAAAGTATTCAAGACAATCCATTCCTTCGAGCAATTTTTTGAACATTCCATGCTCGAGAAATCGC
* * * *
194 ATCATTTTATCTAAATAGTTTGGCATTTGGTAAACAACTTTTGGTCTTTGAATTAAAAACCTATT
194 ATCA-TTTGTCTAAATAGTTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATT
* * * * * * * *
259 TACGTGAGAGTTTTTTTTTCTCTTCGTTCTTAGATGAACTTCCAAACTTGACGAACTTTTACGAG
258 TACGTGAGA--ATTTTTCTCTCTTGGTTCTTGGACGAACTT-CTAACTTGACAAACTTTTACCAG
* * * *
324 TTCTTCAATAACTTCGGTTTCTTAAAGTATTAAGGACAA-CACATT-CTTAGAGCAA-TTTTTGA
320 TTCTTCTATAACTTCGG-TTCTTAAAGTATTCATGACAATC-CATTCCTTCGAGCAATTTTTTGA
* * * *
386 ACATTACATACTCGGGAAATCACATCATTTGGTCTAAATACTTTGTCATTTTCTAAACTACTTTT
383 ACATTCCATACTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTCTAAACAACTTTT
* * * *
451 GGTCTTTGAATGAAAAACTT-TCTTATGTGAGAGTTGTTTCTATCTTGGTTCTTGGACGAACTTC
448 GGTCTTTAAATTAAAAACTTAT-TTACGTGAGAGTTGTTTCTCTCTTGGTTCTTGGACGAACTTC
* * * ** *
515 CGAACTTGGC-AAGCTTTTACGAGTTCTTTTATAACTTCAGTTCAATAAAGTATTCATGACGATC
512 CGAACTTGACGAAG-TTTTACGAGTTCATTTAAAACTTCAGTTCCTTAAAGTATTCATGAAGATC
* * * ** * *
579 CATTCCTTAAAGAAATTTTTCGAAAATT-TAATGCGTGGGAAATCGCATCATTTTTTTTCTAAAC
576 CATTCCTTAAAGCAATTTTTCGAACATTCCAA-GCACGGGAAATCGCATCA--TTATGTCTAAA-
643 TA-TTTGT
637 TAGTTTGT
** * * * *
650 CATTTGGTAAGCAACTTTTGGGCTTTGAATGAAAAACTTATTTACATGAGAATTGTTTCTCTCTT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATGAAAAACCTATTTACGTGAGAATTGTTTCTCTCTT
* * * * * * * * * *
715 GGATATTGGATGAACTTCTAAACTTGATAAACTTTGACGACTTCTTCTATAACTTCG-GTTCTTT
66 GGTTCTTAGACGAACTTCCAAACTTGACAAACTTTTACGAGTTCTTCTATAACTTTGATTTC-TT
* * * * * * * *
779 AAAGTTTTCACGACGATCTATTCCTTCGAGCAATTTTCTGAACATTCCATGCTAGGGAAATCACA
130 AAAGTATTCAAGACAATCCATTCCTTCGAGCAATTTTTTGAACATTCCATGCTCGAGAAATCGCA
** * *
844 TCATCTTGTCTACTTAGTTTGTCATTTGGTATACAACTTTTGGTCATTT-AATTAAAAACTTATT
195 TCAT-TTGTCTAAATAGTTTGTCATTTTGTAAACAACTTTTGGTC-TTTGAATTAAAAACTTATT
* * * * * * *
908 TACGTGAAAATTTATTATCTCTTGGATCATGGACAAACTTCCTAACTTCACAAAATTTTACCAGT
258 TACGTGAGAATTT-TTCTCTCTTGGTTCTTGGACGAACTT-CTAACTTGACAAACTTTTACCAGT
* * * * ** * *
973 TGTTCTGTAACTTTGGTTCATTAAGGTATTCATGACAATCCCCTCCTTCGAGTAATTTTTTTAAC
321 TCTTCTATAACTTCGGTTC-TTAAAGTATTCATGACAATCCATTCCTTCGAGCAATTTTTTGAAC
* * *
1038 ATTCCATGCTCGGGAAATCGCATCATTTGTTCTAAATAGTTTGTCATTTTGTAAACAACTTTTGG
385 ATTCCATACTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTCTAAACAACTTTTGG
* *
1103 T-TTATAAATTAAAAAGTTATTTATGTGAGAGTT-TTTCTCTCTTTGG-TCTTGGACGAACTTCC
450 TCTT-TAAATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTC-TTGGTTCTTGGACGAACTTCC
*
1165 GAACTTGACGAAGTTTTACGAGTTCATTTAAAACTTCAGTTCCTTAAAGTATTCATGAAGATTCA
513 GAACTTGACGAAGTTTTACGAGTTCATTTAAAACTTCAGTTCCTTAAAGTATTCATGAAGATCCA
** * *
1230 TTCCTTCGAGCAATTTTCCCAACATTCCAAGCACGGGAAATCGCATCATTATGTCTAAATAGTTT
578 TTCCTTAAAGCAATTTTTCGAACATTCCAAGCACGGGAAATCGCATCATTATGTCTAAATAGTTT
1295 GT
643 GT
* * ** * *
1297 CCTTTTCTAAACAACTTTTGGTCCTTGAATTTAAAACCTATTTATGTGAGAATTGTTTCTCTTTT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATGAAAAACCTATTTACGTGAGAATTGTTTCTCTCTT
* * * * * * *
1362 GGCTCTTAGATGAACTTCCAAACTAGACATACTTTTATGGGTTCTTCTATAACTTTGATTTCTTC
66 GGTTCTTAGACGAACTTCCAAACTTGACAAACTTTTACGAGTTCTTCTATAACTTTGATTTCTTA
*
1427 AAGTATTCAAGACAATCCATTCCTTAGAGCAATTTTTTGAACATTCCATGCTCGAGAAATCGCAT
131 AAGTATTCAAGACAATCCATTCCTTCGAGCAATTTTTTGAACATTCCATGCTCGAGAAATCGCAT
* * * * *
1492 CATTTGTTCTAAATACTTTGTGATTTTCTAAACGACTTTTGGTCTTTGAATGAAAAACTTATTTA
196 CATTTG-TCTAAATAGTTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTA
*
1557 CGTGAGAGTTTTTTCTCTCTTGGTTCTTGGACGAACTTCTGAACTTGGAC-AACTTTTACCAGTT
260 CGTGAGA-ATTTTTCTCTCTTGGTTCTTGGACGAACTTCT-AACTT-GACAAACTTTTACCAGTT
* * * * **
1621 CATCTATAACATTC-GTTCCTTAAAGTATACATGACAATCCATTCCTTCAAACAATTTTTCAAAC
322 CTTCTATAAC-TTCGGTT-CTTAAAGTATTCATGACAATCCATTCCTTCGAGCAATTTTTTGAAC
* * * * *
1685 ATTCCATGCTCGGGAAAACGCATCGTTTGATCTAAATAGTTTGTCATTTTCTAAACAACTTTGGG
385 ATTCCATACTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTCTAAACAACTTTTGG
* * * * *
1750 TCTATAAATTAAAATCTTATTTACGTGAGAGTTGTTTCTCTCTTTGTTCTTGGATGAACTTTCGA
450 TCTTTAAATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTCTTGGTTCTTGGACGAACTTCCGA
* * * *
1815 ACTTGACGAAGTTTTACGAGTTCTTTTAAAAATTCAGTTCCTTAAAGTATTCATGATGATTCATT
515 ACTTGACGAAGTTTTACGAGTTCATTTAAAACTTCAGTTCCTTAAAGTATTCATGAAGATCCATT
* *
1880 CCTTCAAGCAATTTTTCGAACAATCCAAGCACGGGAAATCGCATCATTATGTCTAAATAGTTTGT
580 CCTTAAAGCAATTTTTCGAACATTCCAAGCACGGGAAATCGCATCATTATGTCTAAATAGTTTGT
* * *
1945 CATTTTCTAAACAACTTTTGGTCTTTGAAT-TAAAACCTATTTATGTGAGAGTTGTTTCTCTCTT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATGAAAAACCTATTTACGTGAGAATTGTTTCTCTCTT
* * *
2009 GGTTCTTAGACGAACTTCCAAACTTGACATACTTTTACGAGTTCCTCTATAACTGTGATTTCTTA
66 GGTTCTTAGACGAACTTCCAAACTTGACAAACTTTTACGAGTTCTTCTATAACTTTGATTTCTTA
* * * *
2074 AAGTATTCAAGACAATCCATTCCTTAGAGTAATTTTTTGAACATTCCATACTCGGGAAATCGCAT
131 AAGTATTCAAGACAATCCATTCCTTCGAGCAATTTTTTGAACATTCCATGCTCGAGAAATCGCAT
* *
2139 CATTTGGTCTAAATAGTTTGTCATTTTGTAAACAACTTTTGGTCTTTAAATTAAAATCTTATTTA
196 CATTT-GTCTAAATAGTTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTA
* * * ** * * *
2204 TGTGAGAATTGTTTCTCTCTTTGTTCTTGGACAAACTTCTGAACTTGATGAAGTTTCACAAGTTC
260 CGTGAGAATT-TTTCTCTCTTGGTTCTTGGACGAACTTCT-AACTTGACAAACTTTTACCAGTTC
* * * * * ** * *
2269 TTTTAAAACTTCAGTTCCTTAAACTATTCATTATGATACATTCCTTCGAGCAATTTTTCGAACAT
323 TTCTATAACTTCGGTT-CTTAAAGTATTCATGACAATCCATTCCTTCGAGCAATTTTTTGAACAT
* * * * * * * *
2334 TCCATACACGCGG-AATTGTATCTTTTTGTTTAAATAGTTTTTCATTTTCTAAACAACTATTGGT
387 TCCATACTCG-GGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTCTAAACAACTTTTGGT
* * * * *
2398 CTTTCAATTAAAAACCTATTTACGTGAGAGTTGTTTTTCTCTTGGTTCTTAGG-TGAACTTCCAA
451 CTTTAAATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTCTTGGTTCTT-GGACGAACTTCCGA
* * * ** *
2462 ACTTGACGAACTTTTACGAGTTC-TTCAATAACTTCGGTTTTTTAAAGTATTCAGGAA-ATCCAT
515 ACTTGACGAAGTTTTACGAGTTCATTTAA-AACTTCAGTTCCTTAAAGTATTCATGAAGATCCAT
* * * * * * **
2525 TCCTTAGAGCAATTTTTTGAACATTCCATGCTCGGTAAATCGCATCATT-TGGTATAAATACATT
579 TCCTTAAAGCAATTTTTCGAACATTCCAAGCACGGGAAATCGCATCATTAT-GTCTAAATAGTTT
2589 GT
643 GT
* * * * * *
2591 CATTTTCTAAACTACTTTTGGTCTTTGAATGAAAAACTTATTTACGTGATAGTTGTTTTTATCTT
1 CATTTTCTAAACAACTTTTGGTCTTTGAATGAAAAACCTATTTACGTGAGAATTGTTTCTCTCTT
* * * * * * *
2656 GGTTCTTGGACGAACTTCCGAACTTGGCAAACTTTTACGAGTTCTTTTATAAC-TTAAGTTCCAT
66 GGTTCTTAGACGAACTTCCAAACTTGACAAACTTTTACGAGTTCTTCTATAACTTTGA-TTTCTT
* * * * *
2720 AAAGTATTCATGACGATCCATTCCTTCGAGCAATTTTTCGAACATTCCAAGCAC-AGGAAATCGC
130 AAAGTATTCAAGACAATCCATTCCTTCGAGCAATTTTTTGAACATTCCATGCTCGA-GAAATCGC
* * * * * ** *
2784 TTCATTATGTCTAAATTGTTTGTCATTTTCTAAACAACTGTTGCTCTTTGAATTAAATTCCTATT
194 ATCATT-TGTCTAAATAGTTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATT
* * * * * * *
2849 TATGTGAGAGTTGTTTCTCTCTTGGTTCTTAGATGAACTAACAAACTTGA-AATACTTTTACGAG
258 TACGTGAGAATT-TTTCTCTCTTGGTTCTTGGACGAACT-TCTAACTTGACAA-ACTTTTACCAG
* * ** *
2913 TTCTTCTATAACTTCGATTTCTTAAAGTATTCAAGACAATCCATTCCTTAAAGTAATTTTTTGAA
320 TTCTTCTATAACTTCG-GTTCTTAAAGTATTCATGACAATCCATTCCTTCGAGCAATTTTTTGAA
* ** *
2978 CATTCCATTCTCGGGAAATCGCATCATTTGGTCTAAAT-GCTTTGTCATTTTGAAAATAACTTTT
384 CATTCCATACTCGGGAAATCGCATCATTTGGTCTAAATAG-TTTGTCATTTTCTAAACAACTTTT
* * * * **
3042 GGTCTTTGAATGAAAAACTTATTTACGTAAGAGTTGTTTCTCTCTTGGTTCTTGGACAAACTTTT
448 GGTCTTTAAATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTCTTGGTTCTTGGACGAACTTCC
* * * *
3107 GAACTTGGA-AAACTTTTACGAGTTCATCTATAACTTTC-GTTCCTTAAAGTATTCATGACA-AT
513 GAACTT-GACGAAGTTTTACGAGTTCATTTAAAAC-TTCAGTTCCTTAAAGTATTCATGA-AGAT
3169 CCATT
575 CCATT
Statistics
Matches: 2118, Mismatches: 357, Indels: 99
0.82 0.14 0.04
Matches are distributed among these distances:
645 1 0.00
646 117 0.06
647 1284 0.61
648 284 0.13
649 327 0.15
650 104 0.05
651 1 0.00
ACGTcount: A:0.28, C:0.18, G:0.14, T:0.40
Consensus pattern (644 bp):
CATTTTCTAAACAACTTTTGGTCTTTGAATGAAAAACCTATTTACGTGAGAATTGTTTCTCTCTT
GGTTCTTAGACGAACTTCCAAACTTGACAAACTTTTACGAGTTCTTCTATAACTTTGATTTCTTA
AAGTATTCAAGACAATCCATTCCTTCGAGCAATTTTTTGAACATTCCATGCTCGAGAAATCGCAT
CATTTGTCTAAATAGTTTGTCATTTTGTAAACAACTTTTGGTCTTTGAATTAAAAACTTATTTAC
GTGAGAATTTTTCTCTCTTGGTTCTTGGACGAACTTCTAACTTGACAAACTTTTACCAGTTCTTC
TATAACTTCGGTTCTTAAAGTATTCATGACAATCCATTCCTTCGAGCAATTTTTTGAACATTCCA
TACTCGGGAAATCGCATCATTTGGTCTAAATAGTTTGTCATTTTCTAAACAACTTTTGGTCTTTA
AATTAAAAACTTATTTACGTGAGAGTTGTTTCTCTCTTGGTTCTTGGACGAACTTCCGAACTTGA
CGAAGTTTTACGAGTTCATTTAAAACTTCAGTTCCTTAAAGTATTCATGAAGATCCATTCCTTAA
AGCAATTTTTCGAACATTCCAAGCACGGGAAATCGCATCATTATGTCTAAATAGTTTGT
Done.