Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009728.1 Kokia drynarioides strain JFW-HI SEQ_124447, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47014

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
70--122
13
4.2
13
81
11
65
0
33
0
66
0.92
71--121
4
12.2
4
80
15
59
0
31
0
68
0.90
71--120
9
5.9
9
77
13
52
0
30
0
70
0.88
11405--11460
30
1.9
29
85
7
78
37
21
10
30
1.87
13972--14018
23
2.0
24
84
16
62
38
17
0
44
1.48
25047--25121
33
2.2
34
80
4
89
41
12
2
44
1.55
27203--27294
45
2.0
45
95
0
166
17
27
7
47
1.74
28562--28628
23
2.9
23
71
8
73
11
16
23
47
1.80
36647--36682
17
2.1
17
94
0
63
55
2
0
41
1.14
40978--41038
12
5.1
12
79
0
68
72
19
1
6
1.16
40976--41044
24
2.9
24
77
0
84
71
18
2
7
1.23
42674--42724
24
2.1
24
100
0
102
56
0
15
27
1.39
43715--43919
109
1.9
109
80
4
243
30
13
17
39
1.88

Tables:   1

The End!