Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009732.1 Kokia drynarioides strain JFW-HI SEQ_124451, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  104845

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
170--205
14
2.6
14
95
0
63
44
5
19
30
1.73
20103--20148
22
2.1
22
91
0
74
73
0
4
21
1.00
27925--27987
33
1.9
32
83
3
81
49
9
7
33
1.64
45247--45282
17
2.0
19
89
10
58
66
0
33
0
0.92
45242--45303
21
3.0
21
75
13
58
61
1
37
0
1.06
45695--45733
17
2.3
17
82
8
53
17
12
10
58
1.61
58833--58873
14
3.1
14
79
6
50
43
7
0
48
1.30
58863--58906
23
2.0
22
86
4
61
38
0
15
45
1.47
59343--59414
36
2.0
36
100
0
144
30
25
13
30
1.94
63414--63460
12
3.9
12
78
8
51
0
27
2
70
0.99
74058--74147
44
2.0
44
97
0
171
21
28
13
36
1.91
81344--81564
82
2.7
82
89
0
334
23
18
26
31
1.98
84761--84790
10
3.0
10
90
0
51
56
0
0
43
0.99
94802--94832
15
2.1
15
93
0
53
12
48
0
38
1.42
97572--97651
23
3.5
22
84
3
88
35
28
22
13
1.92
97640--97693
23
2.3
23
87
0
81
38
20
29
11
1.87
102682--102974
29
10.0
29
81
6
322
29
3
32
35
1.73
102682--102978
59
5.1
58
85
6
350
29
3
32
35
1.73
102720--102965
88
2.8
88
86
3
343
30
2
31
35
1.71
103980--104006
13
2.1
13
100
0
54
44
14
0
40
1.46
104754--104821
11
6.0
11
76
11
66
54
1
1
42
1.18
104748--104821
17
4.3
17
84
8
96
52
1
1
44
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
104747--104821
6
13.0
6
79
13
77
52
1
1
45
1.17
104748--104821
23
3.2
23
80
14
73
52
1
1
44
1.17

Tables:   1

The End!