Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009735.1 Kokia drynarioides strain JFW-HI SEQ_124454, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68718

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4213--4248
3
12.0
3
100
0
72
66
0
0
33
0.92
5598--5679
26
3.2
26
78
1
76
25
18
23
32
1.97
13774--13874
25
4.0
25
86
1
130
23
18
26
30
1.98
15588--15642
25
2.2
25
93
3
94
65
5
0
29
1.15
15597--15653
12
4.5
13
80
8
73
66
3
0
29
1.08
21049--21148
47
2.1
47
96
0
182
49
24
4
23
1.67
21192--21217
6
4.3
6
100
0
52
19
46
0
34
1.50
22697--22979
143
2.0
139
89
6
426
30
14
18
36
1.91
26021--26056
17
2.2
17
95
5
65
47
2
5
44
1.41
26700--26744
24
2.0
22
82
8
54
44
11
15
28
1.81
31655--31739
34
2.5
34
74
0
89
45
11
8
34
1.70
32124--32210
12
7.0
12
75
11
77
64
4
10
20
1.42
32141--32207
26
2.6
26
92
0
107
65
5
8
19
1.41
32165--32216
14
3.9
13
78
9
52
67
3
7
21
1.32
36329--36476
74
2.0
74
98
0
287
64
11
6
16
1.46
36805--36844
21
2.0
21
85
9
57
30
25
5
40
1.77
39624--39696
38
1.9
38
82
0
92
39
30
16
13
1.87
42766--43080
71
4.4
71
85
1
382
27
23
15
33
1.95
42810--43039
107
2.2
106
79
9
245
27
24
15
32
1.95
42781--43039
36
7.3
36
73
12
205
27
23
15
33
1.95
42766--43075
36
8.7
35
73
11
193
27
23
15
33
1.95
44737--44796
25
2.4
25
78
10
68
53
16
5
25
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49026--49068
19
2.3
19
91
0
68
46
23
13
16
1.83
49023--49068
13
3.7
12
82
8
56
47
23
13
15
1.80
49749--49819
30
2.4
30
100
0
142
35
23
4
36
1.75
51958--52004
23
2.1
22
92
4
76
17
8
4
70
1.29
52295--52362
20
3.1
23
76
14
56
22
2
10
64
1.37
52308--52365
20
2.7
22
79
15
68
22
0
8
68
1.16
62476--62864
52
7.5
52
88
0
519
37
22
13
27
1.91
64508--64578
22
3.2
21
62
11
52
32
22
5
39
1.77
64496--64584
45
2.0
45
100
0
178
33
20
4
41
1.72
67518--67566
21
2.3
21
78
0
53
20
12
10
57
1.64

Tables:   1

The End!