Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009736.1 Kokia drynarioides strain JFW-HI SEQ_124455, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  142179

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6270--6313
17
2.6
17
85
0
61
22
0
6
70
1.11
20613--20671
17
3.6
16
84
13
68
66
0
1
32
1.02
20625--20653
9
3.3
9
90
9
51
68
0
0
31
0.89
23712--23759
24
2.0
25
84
12
64
70
4
8
16
1.27
31103--31160
29
2.0
29
100
0
116
51
6
10
31
1.62
49395--49430
15
2.4
15
90
0
54
19
30
11
38
1.86
49403--49437
15
2.3
15
95
0
61
11
28
5
54
1.59
60511--60552
3
14.3
3
95
5
77
30
0
0
69
0.89
68628--68661
16
2.1
16
88
0
50
58
11
5
23
1.55
72142--72166
12
2.1
12
100
0
50
40
16
8
36
1.77
75570--75646
21
3.7
21
73
3
66
32
25
14
27
1.94
81306--81351
16
2.9
16
96
3
85
39
23
6
30
1.80
87207--87387
52
3.5
52
85
2
213
37
23
13
25
1.91
100252--100277
6
4.3
6
100
0
52
84
0
15
0
0.62
100960--101004
13
3.6
12
82
8
54
80
0
17
2
0.82
106336--106522
52
3.6
52
89
0
293
32
22
17
27
1.96
108122--108273
28
5.4
28
76
8
130
36
19
15
28
1.92
108171--108358
28
6.7
28
78
3
110
40
24
14
20
1.90
108228--108358
56
2.3
56
80
5
140
45
23
13
16
1.83
108122--108308
84
2.2
84
84
1
241
37
21
14
26
1.92
119038--119103
33
2.0
33
100
0
132
24
18
21
36
1.95
122327--122352
3
8.7
3
100
0
52
0
30
0
69
0.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
139445--139499
28
2.0
28
92
0
92
30
14
27
27
1.95

Tables:   1

The End!