Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009742.1 Kokia drynarioides strain JFW-HI SEQ_124461, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42653

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
767--816
23
2.2
23
92
0
82
10
26
22
42
1.84
782--884
23
4.5
22
78
6
89
12
20
27
39
1.88
1494--1528
16
2.1
17
89
10
54
45
0
0
54
0.99
5357--5392
19
1.9
18
88
5
54
55
8
0
36
1.30
14084--14128
17
2.6
17
83
13
56
20
2
2
75
1.01
14458--14511
8
6.5
8
78
16
56
33
0
1
64
1.04
14744--14801
20
2.9
20
78
14
66
74
6
6
12
1.22
16727--16769
20
2.1
21
87
12
63
53
4
0
41
1.21
21135--21190
27
2.0
28
83
10
71
35
1
0
62
1.06
21135--21194
28
2.1
28
82
11
70
35
1
0
63
1.05
25841--25871
9
3.4
9
90
0
53
48
22
9
19
1.78
26979--27210
51
4.5
51
84
4
286
30
23
13
31
1.94
26979--27219
103
2.3
105
82
5
292
30
23
14
32
1.94
28622--28712
42
2.2
42
86
4
121
18
8
10
61
1.54
31408--31432
13
1.9
13
100
0
50
0
0
8
92
0.40
33968--34255
54
5.3
54
97
0
542
19
36
19
24
1.95
33968--34292
54
6.0
54
94
0
310
20
36
19
24
1.95
36113--36156
22
2.0
22
82
8
54
59
2
2
36
1.23
37072--37097
13
2.0
13
100
0
52
46
7
0
46
1.31
37065--37127
20
3.1
20
76
2
63
41
17
1
39
1.59
37101--37154
27
2.0
28
85
3
74
40
14
5
38
1.70
40005--40030
6
4.3
6
100
0
52
15
15
0
69
1.20
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40072--40159
17
5.1
17
80
2
95
43
0
2
54
1.12
40106--40161
11
4.9
11
78
10
51
41
0
1
57
1.09
40071--40169
35
2.8
35
86
7
121
43
0
3
53
1.16
40103--40170
6
11.5
6
76
7
68
45
0
2
51
1.16
40851--40894
21
2.1
21
86
0
61
52
2
2
43
1.26
41176--41320
78
1.9
78
86
2
211
17
24
42
15
1.88
41951--42441
29
16.8
29
73
17
385
34
31
4
29
1.77
41951--42440
59
8.4
59
87
4
679
34
31
4
29
1.77

Tables:   1

The End!