Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009755.1 Kokia drynarioides strain JFW-HI SEQ_124474, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40250

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2714--2757
20
2.3
19
84
11
54
40
4
0
54
1.21
4321--4478
64
2.5
63
94
2
280
50
4
0
44
1.21
5000--5358
39
9.3
39
73
12
310
24
18
26
31
1.97
5050--5420
79
4.7
79
89
1
519
23
18
25
32
1.97
5000--5420
158
2.7
157
84
6
527
24
18
25
31
1.97
5438--5532
50
1.9
50
85
8
131
27
26
11
34
1.91
6475--6557
38
2.2
38
88
2
121
15
21
16
45
1.85
10362--10441
31
2.6
31
86
3
110
42
11
16
30
1.83
12912--13090
67
2.7
67
85
7
242
50
4
1
43
1.29
13066--13105
17
2.3
17
84
16
55
75
0
2
22
0.93
13496--13550
18
3.0
19
81
7
69
41
18
9
30
1.81
17667--17691
9
2.8
9
100
0
50
88
0
0
12
0.53
19448--19501
28
1.9
28
81
7
65
27
11
12
48
1.76
22650--22738
36
2.5
36
94
0
151
44
13
13
28
1.81
22672--22732
19
3.3
19
67
17
56
50
13
9
26
1.72
32039--32090
21
2.5
21
80
0
59
30
26
11
30
1.92
37938--37967
7
4.3
7
95
0
51
0
23
0
76
0.78
38551--38605
17
3.2
17
77
7
58
49
14
14
21
1.79

Tables:   1

The End!