Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009768.1 Kokia drynarioides strain JFW-HI SEQ_124488, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  174551

Tables:   1   

This is table  1  of  1  ( 60 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1601--1658
31
1.9
31
85
3
82
62
6
13
17
1.52
6778--6835
27
2.1
28
84
9
75
70
6
1
20
1.19
9582--9641
31
1.9
31
93
0
102
28
21
3
46
1.67
9592--9654
31
2.1
29
85
8
83
30
22
3
44
1.68
10274--10350
38
2.0
39
85
14
106
61
1
9
28
1.35
34461--34580
60
2.0
60
98
0
231
34
16
17
31
1.93
44026--44063
19
2.0
19
100
0
76
31
15
15
36
1.90
47170--47213
15
3.0
15
87
9
56
11
27
9
52
1.67
55508--55687
52
3.5
52
90
3
274
26
11
23
38
1.88
55688--55831
52
2.8
52
85
5
202
25
14
23
36
1.93
55556--55825
138
2.0
138
85
1
371
25
12
23
38
1.91
61337--61438
33
3.1
33
76
8
109
30
21
18
29
1.97
66164--66188
12
2.1
12
100
0
50
36
24
16
24
1.94
70681--70727
14
3.3
15
74
14
55
19
0
29
51
1.47
72277--72375
4
24.0
4
70
19
53
70
5
3
21
1.20
72277--72327
21
2.4
21
84
9
77
76
3
1
17
1.03
72259--72323
26
2.4
28
80
12
73
72
6
1
20
1.14
72306--72349
17
2.5
18
82
14
56
70
4
6
18
1.27
72306--72350
18
2.6
17
80
16
56
71
4
6
17
1.25
72393--72421
3
9.7
3
100
0
58
68
0
0
31
0.89
82668--82714
24
2.0
24
91
0
76
27
8
6
57
1.53
85660--85690
3
10.3
3
100
0
62
32
0
0
67
0.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
85878--85924
12
4.0
12
83
2
60
25
14
12
46
1.80
86018--86078
23
2.6
24
86
2
88
29
13
18
39
1.88
86064--86122
23
2.6
23
97
0
109
42
10
16
30
1.82
87162--87438
130
2.1
129
81
7
314
34
12
13
39
1.82
92000--92043
22
2.0
22
86
0
61
43
4
2
50
1.35
92129--92176
15
3.2
14
75
13
51
43
2
2
52
1.24
92129--92176
16
3.2
15
75
18
55
43
2
2
52
1.24
92131--92178
14
3.3
14
78
16
53
43
2
2
52
1.24
98327--98358
3
10.7
3
93
0
55
31
3
0
65
1.08
108561--108657
44
2.2
45
88
3
144
32
15
14
37
1.88
113311--113413
43
2.4
44
88
4
156
31
27
17
24
1.97
113816--113909
47
2.0
47
100
0
188
31
27
10
29
1.90
119910--119976
21
3.0
21
81
14
73
34
11
44
8
1.73
120520--120560
19
2.1
20
86
4
57
53
0
2
43
1.13
121305--121733
41
10.3
41
75
10
305
25
25
23
24
2.00
121331--121512
79
2.3
80
81
2
204
27
26
20
24
1.99
121494--121597
52
2.0
52
84
0
136
27
28
21
22
1.99
121453--121633
93
1.9
93
86
4
258
26
28
22
23
1.99
121421--121679
134
1.9
134
86
1
367
26
27
22
23
2.00
121789--121887
40
2.5
40
86
0
126
22
21
16
40
1.91
124426--124463
19
2.0
19
100
0
76
52
10
10
26
1.68
126260--126297
15
2.6
14
84
15
51
18
15
5
60
1.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
139401--140268
38
22.8
38
75
10
465
35
20
16
28
1.94
139401--139831
190
2.2
192
87
1
596
34
21
16
27
1.94
139401--140013
115
5.4
111
78
9
438
34
21
16
27
1.95
139394--140268
77
11.5
77
74
11
565
35
20
16
28
1.94
140420--140458
6
6.2
6
88
5
51
82
0
0
17
0.68
140424--140458
13
2.6
14
86
13
56
82
0
0
17
0.66
140424--140458
7
5.0
7
89
10
54
82
0
0
17
0.66
143131--143530
201
2.0
201
88
1
595
37
15
9
37
1.80
150886--150940
3
18.3
3
92
0
92
63
1
32
1
1.15
151905--151944
21
2.0
21
90
5
64
35
5
20
40
1.74
157714--157750
18
2.0
19
89
5
58
2
0
21
75
0.92
158162--158705
202
2.6
206
84
4
704
24
20
15
38
1.92
160500--160536
18
2.0
19
89
5
58
2
0
21
75
0.92
160948--161815
208
4.2
208
83
4
1076
23
21
16
38
1.93
160948--161715
410
1.9
413
88
1
1159
24
22
15
38
1.93
161577--161732
85
1.8
85
85
0
222
26
26
12
33
1.93

Tables:   1

The End!